Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 AL033527.5-201ENST00000641382 801 ntBASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 PKD1P5-201ENST00000532415 10291 ntBASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 AL121723.1-201ENST00000445194 1519 ntBASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.57■□□□□ 0.24
SCN4BQ8IWT1 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 KRT18P43-201ENST00000469825 1281 ntBASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCN4BQ8IWT1 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms