Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 KRT18P43-201ENST00000469825 1281 ntBASIC16.97■□□□□ 0.31
HERC6Q8IVU3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 SCARNA20.5-201ENST00000516991 142 ntBASIC16.97■□□□□ 0.31
HERC6Q8IVU3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 AC138028.6-201ENST00000616106 1482 ntBASIC16.97■□□□□ 0.31
HERC6Q8IVU3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERC6Q8IVU3 AHCYP2-201ENST00000430630 1300 ntBASIC16.96■□□□□ 0.31
HERC6Q8IVU3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 DRD5P1-201ENST00000456605 1438 ntBASIC16.96■□□□□ 0.31
HERC6Q8IVU3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 AC004898.1-201ENST00000451057 766 ntBASIC16.96■□□□□ 0.31
HERC6Q8IVU3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 AP001582.1-201ENST00000525856 295 ntBASIC16.96■□□□□ 0.31
HERC6Q8IVU3 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 AP006547.1-201ENST00000563435 692 ntBASIC16.96■□□□□ 0.31
HERC6Q8IVU3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC6Q8IVU3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
HERC6Q8IVU3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
HERC6Q8IVU3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HERC6Q8IVU3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HERC6Q8IVU3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
HERC6Q8IVU3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HERC6Q8IVU3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HERC6Q8IVU3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.96■□□□□ 0.3
HERC6Q8IVU3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms