Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 KRT18P1-202ENST00000452408 1331 ntBASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD2Q8IV50 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 POM121L3P-201ENST00000419331 1163 ntBASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 DRAXINP1-201ENST00000437611 948 ntBASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 NCF1C-201ENST00000438382 1427 ntBASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 AC126335.2-201ENST00000623362 4637 ntBASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD2Q8IV50 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms