Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
KRT28Q7Z3Y7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT28Q7Z3Y7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 AC011742.3-201ENST00000439053 820 ntBASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 RNMTL1P1-201ENST00000454103 560 ntBASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 CFL1-214ENST00000534769 758 ntTSL 2 BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 MIR3147-201ENST00000577811 66 ntBASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT28Q7Z3Y7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 PARVG-202ENST00000415224 999 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 CMC1-204ENST00000423894 549 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 AL161670.2-201ENST00000557650 1227 ntBASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 EID1-202ENST00000560490 584 ntTSL 3 BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 BNIP3P13-201ENST00000599968 566 ntBASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 AP003419.4-201ENST00000616071 517 ntBASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT28Q7Z3Y7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 AC104073.2-201ENST00000453737 312 ntBASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 AC013355.1-201ENST00000562625 723 ntBASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 RN7SL555P-201ENST00000584742 339 ntBASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT28Q7Z3Y7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT28Q7Z3Y7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
KRT28Q7Z3Y7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT28Q7Z3Y7 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC20.91■□□□□ 0.94
KRT28Q7Z3Y7 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT28Q7Z3Y7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KRT28Q7Z3Y7 NPPA-201ENST00000376476 728 ntTSL 3 BASIC20.91■□□□□ 0.94
KRT28Q7Z3Y7 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT28Q7Z3Y7 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KRT28Q7Z3Y7 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
KRT28Q7Z3Y7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms