Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 MTND6P24-201ENST00000440466 518 ntBASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 DUX4L27-201ENST00000554796 1261 ntBASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 AC051619.7-201ENST00000568314 623 ntBASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 AL365330.1-201ENST00000607459 531 ntBASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 HMGN1P19-201ENST00000436976 333 ntBASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 AC007967.4-201ENST00000614700 386 ntBASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 AC067750.1-201ENST00000608826 6545 ntBASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CHMP1BQ7LBR1 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms