Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 RPSAP43-201ENST00000402237 625 ntBASIC14.63□□□□□ -0.07
TUBA1AQ71U36 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 DNAJB3-201ENST00000446806 729 ntBASIC14.63□□□□□ -0.07
TUBA1AQ71U36 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 AC112482.1-201ENST00000492080 688 ntBASIC14.63□□□□□ -0.07
TUBA1AQ71U36 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 AP002472.1-201ENST00000577490 586 ntBASIC14.63□□□□□ -0.07
TUBA1AQ71U36 MIR3687-2-201ENST00000577708 61 ntBASIC14.63□□□□□ -0.07
TUBA1AQ71U36 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 MIR3687-1-201ENST00000614492 61 ntBASIC14.63□□□□□ -0.07
TUBA1AQ71U36 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 AC079781.5-202ENST00000641784 3743 ntBASIC14.63□□□□□ -0.07
TUBA1AQ71U36 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 AC097376.2-205ENST00000610159 5334 ntBASIC14.62□□□□□ -0.07
TUBA1AQ71U36 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 MIR1233-2-201ENST00000408138 82 ntBASIC14.62□□□□□ -0.07
TUBA1AQ71U36 MIR1233-1-201ENST00000408722 82 ntBASIC14.62□□□□□ -0.07
TUBA1AQ71U36 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 UPF3AP3-201ENST00000420996 769 ntBASIC14.62□□□□□ -0.07
TUBA1AQ71U36 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.62□□□□□ -0.07
TUBA1AQ71U36 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 AL031055.1-201ENST00000606362 631 ntBASIC14.62□□□□□ -0.07
TUBA1AQ71U36 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1AQ71U36 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.61□□□□□ -0.07
TUBA1AQ71U36 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1AQ71U36 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TUBA1AQ71U36 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1AQ71U36 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.61□□□□□ -0.07
TUBA1AQ71U36 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
TUBA1AQ71U36 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1AQ71U36 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1AQ71U36 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms