Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13CQ709C8 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 AP001582.1-201ENST00000525856 295 ntBASIC12.82□□□□□ -0.36
VPS13CQ709C8 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13CQ709C8 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13CQ709C8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 RN7SL8P-201ENST00000461771 266 ntBASIC12.82□□□□□ -0.36
VPS13CQ709C8 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13CQ709C8 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 AL162426.1-201ENST00000624141 743 ntBASIC12.82□□□□□ -0.36
VPS13CQ709C8 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13CQ709C8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13CQ709C8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13CQ709C8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13CQ709C8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13CQ709C8 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13CQ709C8 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 DPM3-202ENST00000368399 517 ntBASIC12.82□□□□□ -0.36
VPS13CQ709C8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13CQ709C8 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 AC013355.1-201ENST00000562625 723 ntBASIC12.82□□□□□ -0.36
VPS13CQ709C8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13CQ709C8 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13CQ709C8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
VPS13CQ709C8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13CQ709C8 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13CQ709C8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13CQ709C8 AC020910.5-201ENST00000623668 1865 ntBASIC12.82□□□□□ -0.36
VPS13CQ709C8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13CQ709C8 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13CQ709C8 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 GHSR-202ENST00000427970 912 ntBASIC12.81□□□□□ -0.36
VPS13CQ709C8 MARK2P5-201ENST00000507649 634 ntBASIC12.81□□□□□ -0.36
VPS13CQ709C8 MIR4783-201ENST00000580343 82 ntBASIC12.81□□□□□ -0.36
VPS13CQ709C8 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 AC011270.2-201ENST00000624293 2550 ntBASIC12.81□□□□□ -0.36
VPS13CQ709C8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 KRT8P4-201ENST00000509735 1454 ntBASIC12.81□□□□□ -0.36
VPS13CQ709C8 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 AP001065.2-201ENST00000617205 644 ntBASIC12.81□□□□□ -0.36
VPS13CQ709C8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13CQ709C8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.81□□□□□ -0.36
VPS13CQ709C8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms