Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC074338.1-201ENST00000416825 156 ntBASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 AL589739.1-201ENST00000607720 493 ntBASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 AC023511.2-201ENST00000618803 211 ntBASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 MIR1233-2-201ENST00000408138 82 ntBASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 MIR1233-1-201ENST00000408722 82 ntBASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 TSEN15P1-201ENST00000423257 515 ntBASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 AL691403.2-201ENST00000618460 490 ntBASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 Z92544.3-201ENST00000624747 417 ntBASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF549Q6P9A3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
ZNF549Q6P9A3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms