Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 RBM38-204ENST00000371219 760 ntTSL 2 BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 RPL5P21-201ENST00000404620 815 ntBASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 AC132192.2-201ENST00000596206 1147 ntBASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 AL133499.1-201ENST00000596207 608 ntBASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 ACE-203ENST00000413513 2237 ntTSL 2 BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 UFM1-202ENST00000379649 846 ntTSL 4 BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 AL596276.2-201ENST00000447525 331 ntBASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
CDC42BPAQ5VT25 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDC42BPAQ5VT25 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDC42BPAQ5VT25 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC23.21■■□□□ 1.31
CDC42BPAQ5VT25 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDC42BPAQ5VT25 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CDC42BPAQ5VT25 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDC42BPAQ5VT25 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CDC42BPAQ5VT25 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDC42BPAQ5VT25 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CDC42BPAQ5VT25 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDC42BPAQ5VT25 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CDC42BPAQ5VT25 AC010141.1-201ENST00000411585 623 ntBASIC23.21■■□□□ 1.31
CDC42BPAQ5VT25 SLC16A6P1-201ENST00000413214 1059 ntBASIC23.21■■□□□ 1.31
CDC42BPAQ5VT25 EEF1DP6-201ENST00000449232 372 ntBASIC23.21■■□□□ 1.31
CDC42BPAQ5VT25 SYT17-208ENST00000568433 812 ntTSL 3 BASIC23.21■■□□□ 1.31
CDC42BPAQ5VT25 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC23.21■■□□□ 1.31
CDC42BPAQ5VT25 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CDC42BPAQ5VT25 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDC42BPAQ5VT25 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDC42BPAQ5VT25 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC23.21■■□□□ 1.31
CDC42BPAQ5VT25 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC23.2■■□□□ 1.31
CDC42BPAQ5VT25 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
CDC42BPAQ5VT25 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC23.2■■□□□ 1.31
CDC42BPAQ5VT25 AL157414.3-201ENST00000624276 1954 ntBASIC23.2■■□□□ 1.31
CDC42BPAQ5VT25 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDC42BPAQ5VT25 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC23.2■■□□□ 1.3
CDC42BPAQ5VT25 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC23.2■■□□□ 1.3
CDC42BPAQ5VT25 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC23.2■■□□□ 1.3
CDC42BPAQ5VT25 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC23.2■■□□□ 1.3
CDC42BPAQ5VT25 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC23.2■■□□□ 1.3
CDC42BPAQ5VT25 AC005324.6-201ENST00000587972 613 ntBASIC23.2■■□□□ 1.3
CDC42BPAQ5VT25 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC23.2■■□□□ 1.3
CDC42BPAQ5VT25 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
CDC42BPAQ5VT25 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
CDC42BPAQ5VT25 AC009093.2-202ENST00000620513 2079 ntBASIC23.2■■□□□ 1.3
CDC42BPAQ5VT25 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDC42BPAQ5VT25 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDC42BPAQ5VT25 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CDC42BPAQ5VT25 AC004899.1-201ENST00000424687 1714 ntBASIC23.2■■□□□ 1.3
CDC42BPAQ5VT25 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDC42BPAQ5VT25 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDC42BPAQ5VT25 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 AL023803.2-201ENST00000620080 638 ntBASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 MPV17-204ENST00000399052 749 ntTSL 4 BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 MIR3907-201ENST00000579424 151 ntBASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms