Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDR1Q08345 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.26■□□□□ 0.67
DDR1Q08345 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
DDR1Q08345 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
DDR1Q08345 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
DDR1Q08345 KRT8P14-201ENST00000414254 1442 ntBASIC19.25■□□□□ 0.67
DDR1Q08345 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
DDR1Q08345 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC19.25■□□□□ 0.67
DDR1Q08345 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.25■□□□□ 0.67
DDR1Q08345 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDR1Q08345 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.25■□□□□ 0.67
DDR1Q08345 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
DDR1Q08345 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDR1Q08345 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.25■□□□□ 0.67
DDR1Q08345 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDR1Q08345 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDR1Q08345 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDR1Q08345 MIR648-201ENST00000385046 94 ntBASIC19.25■□□□□ 0.67
DDR1Q08345 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDR1Q08345 Z97180.1-201ENST00000445173 988 ntBASIC19.25■□□□□ 0.67
DDR1Q08345 CFL1-214ENST00000534769 758 ntTSL 2 BASIC19.25■□□□□ 0.67
DDR1Q08345 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC19.25■□□□□ 0.67
DDR1Q08345 AP000346.4-201ENST00000614827 381 ntBASIC19.25■□□□□ 0.67
DDR1Q08345 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.25■□□□□ 0.67
DDR1Q08345 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDR1Q08345 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDR1Q08345 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDR1Q08345 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDR1Q08345 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDR1Q08345 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.25■□□□□ 0.67
DDR1Q08345 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDR1Q08345 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDR1Q08345 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDR1Q08345 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.25■□□□□ 0.67
DDR1Q08345 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC19.25■□□□□ 0.67
DDR1Q08345 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDR1Q08345 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
DDR1Q08345 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDR1Q08345 AC007787.1-201ENST00000588095 1583 ntBASIC19.24■□□□□ 0.67
DDR1Q08345 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDR1Q08345 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDR1Q08345 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDR1Q08345 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDR1Q08345 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDR1Q08345 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDR1Q08345 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDR1Q08345 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDR1Q08345 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDR1Q08345 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDR1Q08345 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC19.24■□□□□ 0.67
DDR1Q08345 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC19.24■□□□□ 0.67
DDR1Q08345 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC19.24■□□□□ 0.67
DDR1Q08345 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC19.24■□□□□ 0.67
DDR1Q08345 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC19.24■□□□□ 0.67
DDR1Q08345 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDR1Q08345 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDR1Q08345 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.24■□□□□ 0.67
DDR1Q08345 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDR1Q08345 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDR1Q08345 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDR1Q08345 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
DDR1Q08345 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDR1Q08345 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
DDR1Q08345 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDR1Q08345 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.24■□□□□ 0.67
DDR1Q08345 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
DDR1Q08345 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.24■□□□□ 0.67
DDR1Q08345 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDR1Q08345 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
DDR1Q08345 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
DDR1Q08345 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDR1Q08345 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDR1Q08345 AL158070.2-201ENST00000623713 1621 ntBASIC19.23■□□□□ 0.67
DDR1Q08345 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.23■□□□□ 0.67
DDR1Q08345 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDR1Q08345 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDR1Q08345 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDR1Q08345 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDR1Q08345 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDR1Q08345 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC19.23■□□□□ 0.67
DDR1Q08345 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC19.23■□□□□ 0.67
DDR1Q08345 AC008267.1-201ENST00000474858 1069 ntBASIC19.23■□□□□ 0.67
DDR1Q08345 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDR1Q08345 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC19.23■□□□□ 0.67
DDR1Q08345 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC19.23■□□□□ 0.67
DDR1Q08345 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC19.23■□□□□ 0.67
DDR1Q08345 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
DDR1Q08345 AC106820.3-201ENST00000561653 397 ntBASIC19.23■□□□□ 0.67
DDR1Q08345 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC19.23■□□□□ 0.67
DDR1Q08345 AC026740.1-201ENST00000607068 791 ntBASIC19.23■□□□□ 0.67
DDR1Q08345 AP003419.4-201ENST00000616071 517 ntBASIC19.23■□□□□ 0.67
DDR1Q08345 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDR1Q08345 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDR1Q08345 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC19.23■□□□□ 0.67
DDR1Q08345 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDR1Q08345 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDR1Q08345 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
DDR1Q08345 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
DDR1Q08345 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDR1Q08345 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms