Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PCDH1Q08174 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 AC006058.4-201ENST00000624016 1670 ntBASIC15.2■□□□□ 0.02
PCDH1Q08174 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCDH1Q08174 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDH1Q08174 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PCDH1Q08174 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCDH1Q08174 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PCDH1Q08174 RPL5P21-201ENST00000404620 815 ntBASIC15.2■□□□□ 0.02
PCDH1Q08174 AC074338.1-201ENST00000416825 156 ntBASIC15.2■□□□□ 0.02
PCDH1Q08174 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDH1Q08174 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.2■□□□□ 0.02
PCDH1Q08174 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDH1Q08174 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.2■□□□□ 0.02
PCDH1Q08174 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDH1Q08174 AC025678.2-201ENST00000562061 970 ntBASIC15.2■□□□□ 0.02
PCDH1Q08174 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDH1Q08174 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDH1Q08174 AC025048.3-201ENST00000590609 569 ntBASIC15.2■□□□□ 0.02
PCDH1Q08174 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDH1Q08174 AP001160.2-201ENST00000596071 487 ntBASIC15.2■□□□□ 0.02
PCDH1Q08174 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 AC005702.4-201ENST00000618393 416 ntBASIC15.2■□□□□ 0.02
PCDH1Q08174 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDH1Q08174 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDH1Q08174 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 AC009090.5-201ENST00000624886 2285 ntBASIC15.2■□□□□ 0.02
PCDH1Q08174 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCDH1Q08174 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 KRT8P44-201ENST00000441609 1350 ntBASIC15.2■□□□□ 0.02
PCDH1Q08174 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PCDH1Q08174 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PCDH1Q08174 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDH1Q08174 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
PCDH1Q08174 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDH1Q08174 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PCDH1Q08174 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDH1Q08174 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH1Q08174 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH1Q08174 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH1Q08174 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDH1Q08174 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH1Q08174 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
PCDH1Q08174 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH1Q08174 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH1Q08174 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDH1Q08174 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
PCDH1Q08174 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH1Q08174 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH1Q08174 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH1Q08174 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
PCDH1Q08174 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH1Q08174 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDH1Q08174 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH1Q08174 AC126365.1-201ENST00000578585 1514 ntBASIC15.19■□□□□ 0.02
PCDH1Q08174 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH1Q08174 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDH1Q08174 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH1Q08174 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH1Q08174 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH1Q08174 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH1Q08174 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH1Q08174 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH1Q08174 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH1Q08174 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDH1Q08174 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDH1Q08174 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH1Q08174 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDH1Q08174 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH1Q08174 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.19■□□□□ 0.02
PCDH1Q08174 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.19■□□□□ 0.02
PCDH1Q08174 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDH1Q08174 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDH1Q08174 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDH1Q08174 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDH1Q08174 AC073347.1-201ENST00000421633 2643 ntBASIC15.19■□□□□ 0.02
PCDH1Q08174 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH1Q08174 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH1Q08174 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH1Q08174 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH1Q08174 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDH1Q08174 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH1Q08174 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms