Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.36■□□□□ 0.53
IRX3P78415 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.36■□□□□ 0.53
IRX3P78415 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.36■□□□□ 0.53
IRX3P78415 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.36■□□□□ 0.53
IRX3P78415 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX3P78415 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX3P78415 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.36■□□□□ 0.53
IRX3P78415 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.35■□□□□ 0.53
IRX3P78415 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX3P78415 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX3P78415 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX3P78415 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX3P78415 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX3P78415 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX3P78415 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX3P78415 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX3P78415 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.35■□□□□ 0.53
IRX3P78415 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
IRX3P78415 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.35■□□□□ 0.53
IRX3P78415 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
IRX3P78415 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
IRX3P78415 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX3P78415 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.35■□□□□ 0.53
IRX3P78415 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.35■□□□□ 0.53
IRX3P78415 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IRX3P78415 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.35■□□□□ 0.53
IRX3P78415 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
IRX3P78415 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.35■□□□□ 0.53
IRX3P78415 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
IRX3P78415 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IRX3P78415 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.35■□□□□ 0.53
IRX3P78415 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
IRX3P78415 AC005229.1-201ENST00000392885 409 ntBASIC18.35■□□□□ 0.53
IRX3P78415 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
IRX3P78415 TOMM22P5-201ENST00000416399 439 ntBASIC18.35■□□□□ 0.53
IRX3P78415 AC099336.1-201ENST00000417053 1171 ntBASIC18.35■□□□□ 0.53
IRX3P78415 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.35■□□□□ 0.53
IRX3P78415 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.35■□□□□ 0.53
IRX3P78415 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.35■□□□□ 0.53
IRX3P78415 AL583810.1-201ENST00000553344 1045 ntBASIC18.35■□□□□ 0.53
IRX3P78415 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.35■□□□□ 0.53
IRX3P78415 AC124283.3-201ENST00000570869 594 ntBASIC18.35■□□□□ 0.53
IRX3P78415 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IRX3P78415 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.35■□□□□ 0.53
IRX3P78415 AL049840.4-201ENST00000602422 811 ntBASIC18.35■□□□□ 0.53
IRX3P78415 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.35■□□□□ 0.53
IRX3P78415 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
IRX3P78415 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX3P78415 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
IRX3P78415 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
IRX3P78415 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.35■□□□□ 0.53
IRX3P78415 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.35■□□□□ 0.53
IRX3P78415 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX3P78415 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX3P78415 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX3P78415 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IRX3P78415 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
IRX3P78415 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
IRX3P78415 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC18.34■□□□□ 0.53
IRX3P78415 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX3P78415 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX3P78415 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.34■□□□□ 0.53
IRX3P78415 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IRX3P78415 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX3P78415 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX3P78415 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX3P78415 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX3P78415 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IRX3P78415 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.34■□□□□ 0.53
IRX3P78415 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.34■□□□□ 0.53
IRX3P78415 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX3P78415 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
IRX3P78415 C1QBPP1-201ENST00000400117 770 ntBASIC18.34■□□□□ 0.53
IRX3P78415 BRWD1P1-201ENST00000401091 371 ntBASIC18.34■□□□□ 0.53
IRX3P78415 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.34■□□□□ 0.53
IRX3P78415 KRT18P64-201ENST00000434946 1219 ntBASIC18.34■□□□□ 0.53
IRX3P78415 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.34■□□□□ 0.53
IRX3P78415 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
IRX3P78415 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.34■□□□□ 0.53
IRX3P78415 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.34■□□□□ 0.53
IRX3P78415 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.34■□□□□ 0.53
IRX3P78415 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
IRX3P78415 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.34■□□□□ 0.53
IRX3P78415 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.34■□□□□ 0.53
IRX3P78415 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.34■□□□□ 0.53
IRX3P78415 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IRX3P78415 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IRX3P78415 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.34■□□□□ 0.53
IRX3P78415 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.34■□□□□ 0.53
IRX3P78415 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX3P78415 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.34■□□□□ 0.53
IRX3P78415 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.34■□□□□ 0.53
IRX3P78415 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IRX3P78415 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IRX3P78415 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX3P78415 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
IRX3P78415 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
IRX3P78415 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
IRX3P78415 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
IRX3P78415 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms