Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
UBA52P62987 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
UBA52P62987 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 LINC00895-201ENST00000629028 1637 ntBASIC13.69□□□□□ -0.22
UBA52P62987 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.69□□□□□ -0.22
UBA52P62987 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
UBA52P62987 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.69□□□□□ -0.22
UBA52P62987 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 AL627223.1-201ENST00000416693 442 ntBASIC13.69□□□□□ -0.22
UBA52P62987 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.69□□□□□ -0.22
UBA52P62987 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.69□□□□□ -0.22
UBA52P62987 FAM86C2P-203ENST00000528684 1004 ntBASIC13.69□□□□□ -0.22
UBA52P62987 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
UBA52P62987 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.69□□□□□ -0.22
UBA52P62987 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.69□□□□□ -0.22
UBA52P62987 MIR4745-201ENST00000577608 62 ntBASIC13.69□□□□□ -0.22
UBA52P62987 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
UBA52P62987 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 AC026120.1-201ENST00000611536 926 ntBASIC13.69□□□□□ -0.22
UBA52P62987 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.69□□□□□ -0.22
UBA52P62987 AC009093.7-201ENST00000623853 1223 ntBASIC13.69□□□□□ -0.22
UBA52P62987 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.69□□□□□ -0.22
UBA52P62987 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.69□□□□□ -0.22
UBA52P62987 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
UBA52P62987 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.69□□□□□ -0.22
UBA52P62987 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
UBA52P62987 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.69□□□□□ -0.22
UBA52P62987 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
UBA52P62987 AC020658.6-201ENST00000623564 1870 ntBASIC13.69□□□□□ -0.22
UBA52P62987 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.69□□□□□ -0.22
UBA52P62987 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
UBA52P62987 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.69□□□□□ -0.22
UBA52P62987 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.69□□□□□ -0.22
UBA52P62987 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.69□□□□□ -0.22
UBA52P62987 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
UBA52P62987 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBA52P62987 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
UBA52P62987 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.68□□□□□ -0.22
UBA52P62987 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
UBA52P62987 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
UBA52P62987 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.68□□□□□ -0.22
UBA52P62987 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.68□□□□□ -0.22
UBA52P62987 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.68□□□□□ -0.22
UBA52P62987 AC129492.6-201ENST00000611383 1305 ntBASIC13.68□□□□□ -0.22
UBA52P62987 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.68□□□□□ -0.22
UBA52P62987 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
UBA52P62987 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 CICP23-201ENST00000605013 2741 ntBASIC13.68□□□□□ -0.22
UBA52P62987 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.68□□□□□ -0.22
UBA52P62987 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
UBA52P62987 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
UBA52P62987 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
UBA52P62987 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 AL355306.1-201ENST00000415580 579 ntBASIC13.68□□□□□ -0.22
UBA52P62987 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.68□□□□□ -0.22
UBA52P62987 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.68□□□□□ -0.22
UBA52P62987 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.68□□□□□ -0.22
UBA52P62987 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.68□□□□□ -0.22
UBA52P62987 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.68□□□□□ -0.22
UBA52P62987 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms