Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PDE6CP51160 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 AL035633.1-201ENST00000406139 838 ntBASIC17.05■□□□□ 0.32
PDE6CP51160 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.05■□□□□ 0.32
PDE6CP51160 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
PDE6CP51160 EEF1DP4-201ENST00000446006 880 ntBASIC17.05■□□□□ 0.32
PDE6CP51160 COX20P2-201ENST00000452636 358 ntBASIC17.05■□□□□ 0.32
PDE6CP51160 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.05■□□□□ 0.32
PDE6CP51160 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.05■□□□□ 0.32
PDE6CP51160 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.05■□□□□ 0.32
PDE6CP51160 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.05■□□□□ 0.32
PDE6CP51160 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.05■□□□□ 0.32
PDE6CP51160 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.05■□□□□ 0.32
PDE6CP51160 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.05■□□□□ 0.32
PDE6CP51160 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PDE6CP51160 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.05■□□□□ 0.32
PDE6CP51160 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
PDE6CP51160 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.05■□□□□ 0.32
PDE6CP51160 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.05■□□□□ 0.32
PDE6CP51160 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.05■□□□□ 0.32
PDE6CP51160 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PDE6CP51160 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.05■□□□□ 0.32
PDE6CP51160 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PDE6CP51160 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.04■□□□□ 0.32
PDE6CP51160 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.04■□□□□ 0.32
PDE6CP51160 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.04■□□□□ 0.32
PDE6CP51160 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.04■□□□□ 0.32
PDE6CP51160 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.04■□□□□ 0.32
PDE6CP51160 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.04■□□□□ 0.32
PDE6CP51160 AC105021.1-202ENST00000570572 669 ntBASIC17.04■□□□□ 0.32
PDE6CP51160 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
PDE6CP51160 AL450472.2-201ENST00000603663 1156 ntBASIC17.04■□□□□ 0.32
PDE6CP51160 RN7SL828P-201ENST00000607615 303 ntBASIC17.04■□□□□ 0.32
PDE6CP51160 AL589739.1-201ENST00000607720 493 ntBASIC17.04■□□□□ 0.32
PDE6CP51160 AC009118.2-201ENST00000613275 655 ntBASIC17.04■□□□□ 0.32
PDE6CP51160 AL138828.2-201ENST00000615812 383 ntBASIC17.04■□□□□ 0.32
PDE6CP51160 AL590560.3-201ENST00000623350 461 ntBASIC17.04■□□□□ 0.32
PDE6CP51160 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.04■□□□□ 0.32
PDE6CP51160 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.04■□□□□ 0.32
PDE6CP51160 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PDE6CP51160 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.04■□□□□ 0.32
PDE6CP51160 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PDE6CP51160 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PDE6CP51160 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6CP51160 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6CP51160 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PDE6CP51160 AC073347.1-201ENST00000421633 2643 ntBASIC17.03■□□□□ 0.32
PDE6CP51160 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6CP51160 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PDE6CP51160 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6CP51160 AC092127.1-201ENST00000567093 3455 ntBASIC17.03■□□□□ 0.32
PDE6CP51160 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PDE6CP51160 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PDE6CP51160 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6CP51160 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6CP51160 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.03■□□□□ 0.32
PDE6CP51160 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6CP51160 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.03■□□□□ 0.32
PDE6CP51160 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6CP51160 MTND6P24-201ENST00000440466 518 ntBASIC17.03■□□□□ 0.32
PDE6CP51160 AC002472.2-201ENST00000442739 958 ntBASIC17.03■□□□□ 0.32
PDE6CP51160 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.03■□□□□ 0.32
PDE6CP51160 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms