Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
NKX2-1P43699 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.96□□□□□ -0.33
NKX2-1P43699 HCG4P8-203ENST00000443049 980 ntBASIC12.96□□□□□ -0.33
NKX2-1P43699 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NKX2-1P43699 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.96□□□□□ -0.33
NKX2-1P43699 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.96□□□□□ -0.33
NKX2-1P43699 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
NKX2-1P43699 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.96□□□□□ -0.33
NKX2-1P43699 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.96□□□□□ -0.33
NKX2-1P43699 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.96□□□□□ -0.33
NKX2-1P43699 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.96□□□□□ -0.33
NKX2-1P43699 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.96□□□□□ -0.33
NKX2-1P43699 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.96□□□□□ -0.33
NKX2-1P43699 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
NKX2-1P43699 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-1P43699 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-1P43699 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-1P43699 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-1P43699 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.96□□□□□ -0.34
NKX2-1P43699 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.96□□□□□ -0.34
NKX2-1P43699 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.96□□□□□ -0.34
NKX2-1P43699 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
NKX2-1P43699 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.96□□□□□ -0.34
NKX2-1P43699 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-1P43699 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
NKX2-1P43699 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-1P43699 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-1P43699 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.96□□□□□ -0.34
NKX2-1P43699 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-1P43699 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
NKX2-1P43699 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NKX2-1P43699 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX2-1P43699 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX2-1P43699 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX2-1P43699 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX2-1P43699 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX2-1P43699 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.95□□□□□ -0.34
NKX2-1P43699 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX2-1P43699 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NKX2-1P43699 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
NKX2-1P43699 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
NKX2-1P43699 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.95□□□□□ -0.34
NKX2-1P43699 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX2-1P43699 HMGA1P7-201ENST00000406908 502 ntBASIC12.95□□□□□ -0.34
NKX2-1P43699 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX2-1P43699 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NKX2-1P43699 DUSP5P1-201ENST00000441325 1139 ntBASIC12.95□□□□□ -0.34
NKX2-1P43699 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
NKX2-1P43699 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX2-1P43699 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.95□□□□□ -0.34
NKX2-1P43699 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.95□□□□□ -0.34
NKX2-1P43699 KRT18P34-201ENST00000488218 1270 ntBASIC12.95□□□□□ -0.34
NKX2-1P43699 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 AC008667.4-201ENST00000607370 168 ntBASIC12.95□□□□□ -0.34
NKX2-1P43699 AL121772.3-201ENST00000610840 674 ntBASIC12.95□□□□□ -0.34
NKX2-1P43699 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX2-1P43699 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NKX2-1P43699 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX2-1P43699 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
NKX2-1P43699 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NKX2-1P43699 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX2-1P43699 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
NKX2-1P43699 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-1P43699 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-1P43699 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.94□□□□□ -0.34
NKX2-1P43699 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-1P43699 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.94□□□□□ -0.34
NKX2-1P43699 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
NKX2-1P43699 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms