Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
APOBEC1P41238 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.24□□□□□ -0.13
APOBEC1P41238 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.24□□□□□ -0.13
APOBEC1P41238 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.24□□□□□ -0.13
APOBEC1P41238 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
APOBEC1P41238 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.24□□□□□ -0.13
APOBEC1P41238 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
APOBEC1P41238 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.24□□□□□ -0.13
APOBEC1P41238 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.24□□□□□ -0.13
APOBEC1P41238 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
APOBEC1P41238 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.24□□□□□ -0.13
APOBEC1P41238 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.24□□□□□ -0.13
APOBEC1P41238 AC074338.1-201ENST00000416825 156 ntBASIC14.24□□□□□ -0.13
APOBEC1P41238 AC015922.1-201ENST00000421102 1152 ntBASIC14.24□□□□□ -0.13
APOBEC1P41238 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
APOBEC1P41238 RPL13P2-201ENST00000440687 659 ntBASIC14.24□□□□□ -0.13
APOBEC1P41238 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.24□□□□□ -0.13
APOBEC1P41238 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.24□□□□□ -0.13
APOBEC1P41238 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.24□□□□□ -0.13
APOBEC1P41238 RNA5SP421-201ENST00000516864 134 ntBASIC14.24□□□□□ -0.13
APOBEC1P41238 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.24□□□□□ -0.13
APOBEC1P41238 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
APOBEC1P41238 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 TIMM17BP1-201ENST00000545713 516 ntBASIC14.24□□□□□ -0.13
APOBEC1P41238 AC044860.1-202ENST00000559481 777 ntBASIC14.24□□□□□ -0.13
APOBEC1P41238 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.24□□□□□ -0.13
APOBEC1P41238 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.24□□□□□ -0.13
APOBEC1P41238 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.24□□□□□ -0.13
APOBEC1P41238 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.24□□□□□ -0.13
APOBEC1P41238 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
APOBEC1P41238 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.24□□□□□ -0.13
APOBEC1P41238 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
APOBEC1P41238 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.24□□□□□ -0.13
APOBEC1P41238 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.24□□□□□ -0.13
APOBEC1P41238 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
APOBEC1P41238 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.24□□□□□ -0.13
APOBEC1P41238 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
APOBEC1P41238 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.24□□□□□ -0.13
APOBEC1P41238 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 AC022532.1-201ENST00000624563 1728 ntBASIC14.24□□□□□ -0.13
APOBEC1P41238 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.24□□□□□ -0.13
APOBEC1P41238 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.24□□□□□ -0.13
APOBEC1P41238 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC1P41238 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC1P41238 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC1P41238 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC1P41238 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC1P41238 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.23□□□□□ -0.13
APOBEC1P41238 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC1P41238 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
APOBEC1P41238 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC1P41238 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC1P41238 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
APOBEC1P41238 AC022144.1-201ENST00000602255 1580 ntBASIC14.23□□□□□ -0.13
APOBEC1P41238 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC1P41238 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.23□□□□□ -0.13
APOBEC1P41238 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC1P41238 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC1P41238 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC1P41238 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC1P41238 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.23□□□□□ -0.13
APOBEC1P41238 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC1P41238 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.23□□□□□ -0.13
APOBEC1P41238 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC1P41238 TOMM22P5-201ENST00000416399 439 ntBASIC14.23□□□□□ -0.13
APOBEC1P41238 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.23□□□□□ -0.13
APOBEC1P41238 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.23□□□□□ -0.13
APOBEC1P41238 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.23□□□□□ -0.13
APOBEC1P41238 AC114501.2-201ENST00000439631 535 ntBASIC14.23□□□□□ -0.13
APOBEC1P41238 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.23□□□□□ -0.13
APOBEC1P41238 AC004890.2-204ENST00000481968 304 ntBASIC14.23□□□□□ -0.13
APOBEC1P41238 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.23□□□□□ -0.13
APOBEC1P41238 AC093214.1-201ENST00000511688 1107 ntBASIC14.23□□□□□ -0.13
APOBEC1P41238 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.23□□□□□ -0.13
APOBEC1P41238 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.23□□□□□ -0.13
APOBEC1P41238 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC1P41238 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.23□□□□□ -0.13
APOBEC1P41238 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms