Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC11.66□□□□□ -0.54
CKS2P33552 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CKS2P33552 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC11.66□□□□□ -0.54
CKS2P33552 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC11.65□□□□□ -0.54
CKS2P33552 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
CKS2P33552 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
CKS2P33552 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC11.65□□□□□ -0.54
CKS2P33552 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC11.65□□□□□ -0.54
CKS2P33552 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC11.65□□□□□ -0.54
CKS2P33552 AP001282.1-201ENST00000531301 1499 ntBASIC11.65□□□□□ -0.54
CKS2P33552 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC11.65□□□□□ -0.54
CKS2P33552 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC11.65□□□□□ -0.54
CKS2P33552 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.65□□□□□ -0.54
CKS2P33552 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC11.65□□□□□ -0.54
CKS2P33552 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC11.65□□□□□ -0.54
CKS2P33552 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 DAP-202ENST00000432074 1048 ntTSL 2 BASIC11.65□□□□□ -0.54
CKS2P33552 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
CKS2P33552 SLC25A6P2-201ENST00000497974 877 ntBASIC11.65□□□□□ -0.54
CKS2P33552 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.65□□□□□ -0.54
CKS2P33552 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC11.65□□□□□ -0.54
CKS2P33552 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.65□□□□□ -0.54
CKS2P33552 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.65□□□□□ -0.54
CKS2P33552 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC11.65□□□□□ -0.54
CKS2P33552 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 AL365330.1-201ENST00000607459 531 ntBASIC11.65□□□□□ -0.54
CKS2P33552 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC11.65□□□□□ -0.54
CKS2P33552 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
CKS2P33552 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CKS2P33552 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC11.65□□□□□ -0.54
CKS2P33552 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC11.65□□□□□ -0.54
CKS2P33552 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC11.65□□□□□ -0.54
CKS2P33552 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC11.65□□□□□ -0.55
CKS2P33552 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
CKS2P33552 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
CKS2P33552 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
CKS2P33552 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC11.65□□□□□ -0.55
CKS2P33552 SON-203ENST00000381679 7860 ntTSL 5 BASIC11.65□□□□□ -0.55
CKS2P33552 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
CKS2P33552 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
CKS2P33552 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
CKS2P33552 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
CKS2P33552 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
CKS2P33552 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC11.65□□□□□ -0.55
CKS2P33552 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CKS2P33552 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CKS2P33552 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CKS2P33552 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC11.64□□□□□ -0.55
CKS2P33552 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC11.64□□□□□ -0.55
CKS2P33552 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
CKS2P33552 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
CKS2P33552 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11.64□□□□□ -0.55
CKS2P33552 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CKS2P33552 AC129492.6-201ENST00000611383 1305 ntBASIC11.64□□□□□ -0.55
CKS2P33552 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC11.64□□□□□ -0.55
CKS2P33552 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CKS2P33552 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CKS2P33552 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
CKS2P33552 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CKS2P33552 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.64□□□□□ -0.55
CKS2P33552 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
CKS2P33552 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC11.64□□□□□ -0.55
CKS2P33552 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
CKS2P33552 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC11.64□□□□□ -0.55
CKS2P33552 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC11.64□□□□□ -0.55
CKS2P33552 WASH6P-202ENST00000359512 1437 ntBASIC11.64□□□□□ -0.55
CKS2P33552 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
CKS2P33552 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CKS2P33552 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms