Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CD40LGP29965 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.04□□□□□ -0.16
CD40LGP29965 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.04□□□□□ -0.16
CD40LGP29965 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.03□□□□□ -0.16
CD40LGP29965 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.03□□□□□ -0.16
CD40LGP29965 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.03□□□□□ -0.16
CD40LGP29965 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.03□□□□□ -0.16
CD40LGP29965 AC011474.4-201ENST00000623523 2076 ntBASIC14.03□□□□□ -0.16
CD40LGP29965 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CD40LGP29965 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CD40LGP29965 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.03□□□□□ -0.16
CD40LGP29965 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CD40LGP29965 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CD40LGP29965 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CD40LGP29965 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CD40LGP29965 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 UPK3BP1-201ENST00000428678 509 ntBASIC14.03□□□□□ -0.16
CD40LGP29965 AC246785.2-201ENST00000432512 513 ntBASIC14.03□□□□□ -0.16
CD40LGP29965 SIGLEC30P-201ENST00000455569 941 ntBASIC14.03□□□□□ -0.16
CD40LGP29965 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.03□□□□□ -0.16
CD40LGP29965 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.03□□□□□ -0.16
CD40LGP29965 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.03□□□□□ -0.16
CD40LGP29965 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.03□□□□□ -0.16
CD40LGP29965 AL592071.1-201ENST00000611956 408 ntBASIC14.03□□□□□ -0.16
CD40LGP29965 AC093458.2-201ENST00000623150 629 ntBASIC14.03□□□□□ -0.16
CD40LGP29965 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.03□□□□□ -0.16
CD40LGP29965 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.03□□□□□ -0.16
CD40LGP29965 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.03□□□□□ -0.16
CD40LGP29965 AC131009.4-201ENST00000624048 1740 ntBASIC14.03□□□□□ -0.16
CD40LGP29965 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.03□□□□□ -0.16
CD40LGP29965 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.03□□□□□ -0.16
CD40LGP29965 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.03□□□□□ -0.16
CD40LGP29965 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.03□□□□□ -0.16
CD40LGP29965 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CD40LGP29965 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40LGP29965 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD40LGP29965 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.02□□□□□ -0.16
CD40LGP29965 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD40LGP29965 AC005562.1-201ENST00000583030 3219 ntBASIC14.02□□□□□ -0.16
CD40LGP29965 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.02□□□□□ -0.16
CD40LGP29965 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD40LGP29965 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
CD40LGP29965 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.02□□□□□ -0.16
CD40LGP29965 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.02□□□□□ -0.16
CD40LGP29965 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.02□□□□□ -0.16
CD40LGP29965 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CD40LGP29965 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CD40LGP29965 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.02□□□□□ -0.16
CD40LGP29965 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CD40LGP29965 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CD40LGP29965 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD40LGP29965 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.02□□□□□ -0.17
CD40LGP29965 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.02□□□□□ -0.17
CD40LGP29965 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CD40LGP29965 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD40LGP29965 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.02□□□□□ -0.17
CD40LGP29965 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.02□□□□□ -0.17
CD40LGP29965 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.02□□□□□ -0.17
CD40LGP29965 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.02□□□□□ -0.17
CD40LGP29965 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CD40LGP29965 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.02□□□□□ -0.17
CD40LGP29965 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD40LGP29965 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.02□□□□□ -0.17
CD40LGP29965 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD40LGP29965 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD40LGP29965 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CD40LGP29965 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD40LGP29965 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CD40LGP29965 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD40LGP29965 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD40LGP29965 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD40LGP29965 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms