Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.06■□□□□ 0.16
PTPN3P26045 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN3P26045 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN3P26045 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN3P26045 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.05■□□□□ 0.16
PTPN3P26045 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.05■□□□□ 0.16
PTPN3P26045 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN3P26045 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN3P26045 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
PTPN3P26045 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.05■□□□□ 0.16
PTPN3P26045 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN3P26045 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.05■□□□□ 0.16
PTPN3P26045 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN3P26045 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PTPN3P26045 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN3P26045 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.05■□□□□ 0.16
PTPN3P26045 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.05■□□□□ 0.16
PTPN3P26045 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.05■□□□□ 0.16
PTPN3P26045 AC027369.6-201ENST00000525520 931 ntBASIC16.05■□□□□ 0.16
PTPN3P26045 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.05■□□□□ 0.16
PTPN3P26045 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.05■□□□□ 0.16
PTPN3P26045 AC006538.3-201ENST00000612495 578 ntBASIC16.05■□□□□ 0.16
PTPN3P26045 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.05■□□□□ 0.16
PTPN3P26045 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PTPN3P26045 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN3P26045 AC023157.3-201ENST00000619086 2088 ntBASIC16.05■□□□□ 0.16
PTPN3P26045 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN3P26045 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.05■□□□□ 0.16
PTPN3P26045 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN3P26045 PKD1P5-201ENST00000532415 10291 ntBASIC16.05■□□□□ 0.16
PTPN3P26045 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.05■□□□□ 0.16
PTPN3P26045 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PTPN3P26045 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN3P26045 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN3P26045 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.05■□□□□ 0.16
PTPN3P26045 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
PTPN3P26045 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.04■□□□□ 0.16
PTPN3P26045 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN3P26045 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.04■□□□□ 0.16
PTPN3P26045 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.04■□□□□ 0.16
PTPN3P26045 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN3P26045 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN3P26045 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.04■□□□□ 0.16
PTPN3P26045 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN3P26045 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.04■□□□□ 0.16
PTPN3P26045 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PTPN3P26045 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.04■□□□□ 0.16
PTPN3P26045 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.04■□□□□ 0.16
PTPN3P26045 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.04■□□□□ 0.16
PTPN3P26045 TREML5P-201ENST00000421694 576 ntBASIC16.04■□□□□ 0.16
PTPN3P26045 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN3P26045 KRT18P64-201ENST00000434946 1219 ntBASIC16.04■□□□□ 0.16
PTPN3P26045 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN3P26045 RN7SL618P-201ENST00000477850 296 ntBASIC16.04■□□□□ 0.16
PTPN3P26045 AC097493.3-201ENST00000509725 367 ntBASIC16.04■□□□□ 0.16
PTPN3P26045 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN3P26045 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN3P26045 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.04■□□□□ 0.16
PTPN3P26045 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN3P26045 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.04■□□□□ 0.16
PTPN3P26045 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.04■□□□□ 0.16
PTPN3P26045 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 AL158211.3-201ENST00000607385 239 ntBASIC16.04■□□□□ 0.16
PTPN3P26045 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.04■□□□□ 0.16
PTPN3P26045 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN3P26045 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PTPN3P26045 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN3P26045 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN3P26045 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
PTPN3P26045 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN3P26045 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.03■□□□□ 0.16
PTPN3P26045 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms