Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TNFSF4P23510 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TNFSF4P23510 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
TNFSF4P23510 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TNFSF4P23510 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TNFSF4P23510 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TNFSF4P23510 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.52□□□□□ -0.25
TNFSF4P23510 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
TNFSF4P23510 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
TNFSF4P23510 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TNFSF4P23510 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.52□□□□□ -0.25
TNFSF4P23510 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TNFSF4P23510 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.52□□□□□ -0.25
TNFSF4P23510 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.52□□□□□ -0.25
TNFSF4P23510 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.52□□□□□ -0.25
TNFSF4P23510 DOC2GP-204ENST00000639052 2548 ntBASIC13.52□□□□□ -0.25
TNFSF4P23510 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TNFSF4P23510 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TNFSF4P23510 HYMAI-201ENST00000635591 3347 ntBASIC13.52□□□□□ -0.25
TNFSF4P23510 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TNFSF4P23510 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TNFSF4P23510 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
TNFSF4P23510 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
TNFSF4P23510 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.51□□□□□ -0.25
TNFSF4P23510 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TNFSF4P23510 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.51□□□□□ -0.25
TNFSF4P23510 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.51□□□□□ -0.25
TNFSF4P23510 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.51□□□□□ -0.25
TNFSF4P23510 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.51□□□□□ -0.25
TNFSF4P23510 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.51□□□□□ -0.25
TNFSF4P23510 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.51□□□□□ -0.25
TNFSF4P23510 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.51□□□□□ -0.25
TNFSF4P23510 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.51□□□□□ -0.25
TNFSF4P23510 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.51□□□□□ -0.25
TNFSF4P23510 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 AC004890.2-204ENST00000481968 304 ntBASIC13.51□□□□□ -0.25
TNFSF4P23510 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.51□□□□□ -0.25
TNFSF4P23510 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.51□□□□□ -0.25
TNFSF4P23510 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.51□□□□□ -0.25
TNFSF4P23510 AL512361.1-201ENST00000554200 418 ntBASIC13.51□□□□□ -0.25
TNFSF4P23510 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.51□□□□□ -0.25
TNFSF4P23510 AC010336.2-201ENST00000564226 506 ntBASIC13.51□□□□□ -0.25
TNFSF4P23510 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.51□□□□□ -0.25
TNFSF4P23510 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.51□□□□□ -0.25
TNFSF4P23510 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.51□□□□□ -0.25
TNFSF4P23510 AC074044.1-201ENST00000609673 707 ntBASIC13.51□□□□□ -0.25
TNFSF4P23510 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 AC009118.2-201ENST00000613275 655 ntBASIC13.51□□□□□ -0.25
TNFSF4P23510 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.51□□□□□ -0.25
TNFSF4P23510 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.51□□□□□ -0.25
TNFSF4P23510 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
TNFSF4P23510 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.51□□□□□ -0.25
TNFSF4P23510 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.51□□□□□ -0.25
TNFSF4P23510 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TNFSF4P23510 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TNFSF4P23510 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.5□□□□□ -0.25
TNFSF4P23510 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.5□□□□□ -0.25
TNFSF4P23510 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TNFSF4P23510 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.5□□□□□ -0.25
TNFSF4P23510 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
TNFSF4P23510 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms