Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ATF1P18846 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.88□□□□□ -0.19
ATF1P18846 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.88□□□□□ -0.19
ATF1P18846 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.88□□□□□ -0.19
ATF1P18846 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
ATF1P18846 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ATF1P18846 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.88□□□□□ -0.19
ATF1P18846 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ATF1P18846 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.88□□□□□ -0.19
ATF1P18846 AC002056.1-201ENST00000395613 760 ntBASIC13.88□□□□□ -0.19
ATF1P18846 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 AC074386.1-202ENST00000463561 864 ntBASIC13.88□□□□□ -0.19
ATF1P18846 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.88□□□□□ -0.19
ATF1P18846 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
ATF1P18846 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.88□□□□□ -0.19
ATF1P18846 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.88□□□□□ -0.19
ATF1P18846 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.88□□□□□ -0.19
ATF1P18846 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
ATF1P18846 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.88□□□□□ -0.19
ATF1P18846 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 AC148477.4-201ENST00000613430 1793 ntBASIC13.88□□□□□ -0.19
ATF1P18846 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.88□□□□□ -0.19
ATF1P18846 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.88□□□□□ -0.19
ATF1P18846 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
ATF1P18846 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.88□□□□□ -0.19
ATF1P18846 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATF1P18846 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATF1P18846 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.87□□□□□ -0.19
ATF1P18846 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATF1P18846 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ATF1P18846 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.87□□□□□ -0.19
ATF1P18846 AC018892.3-201ENST00000623986 2499 ntBASIC13.87□□□□□ -0.19
ATF1P18846 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ATF1P18846 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
ATF1P18846 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATF1P18846 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATF1P18846 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.87□□□□□ -0.19
ATF1P18846 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATF1P18846 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.87□□□□□ -0.19
ATF1P18846 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.87□□□□□ -0.19
ATF1P18846 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
ATF1P18846 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATF1P18846 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATF1P18846 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATF1P18846 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ATF1P18846 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.87□□□□□ -0.19
ATF1P18846 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.87□□□□□ -0.19
ATF1P18846 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
ATF1P18846 AC007967.2-201ENST00000432613 625 ntBASIC13.87□□□□□ -0.19
ATF1P18846 TPM4P1-201ENST00000436100 807 ntBASIC13.87□□□□□ -0.19
ATF1P18846 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
ATF1P18846 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.87□□□□□ -0.19
ATF1P18846 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
ATF1P18846 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATF1P18846 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATF1P18846 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ATF1P18846 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.87□□□□□ -0.19
ATF1P18846 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ATF1P18846 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATF1P18846 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATF1P18846 AC127383.1-201ENST00000444697 1800 ntBASIC13.87□□□□□ -0.19
ATF1P18846 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.87□□□□□ -0.19
ATF1P18846 AC023024.2-201ENST00000623561 1993 ntBASIC13.87□□□□□ -0.19
ATF1P18846 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.87□□□□□ -0.19
ATF1P18846 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
ATF1P18846 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ATF1P18846 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATF1P18846 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
ATF1P18846 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.86□□□□□ -0.19
ATF1P18846 PCDHA3-202ENST00000532566 4594 ntBASIC13.86□□□□□ -0.19
ATF1P18846 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.86□□□□□ -0.19
ATF1P18846 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms