Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1DP16402 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1DP16402 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1DP16402 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1DP16402 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1DP16402 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1DP16402 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1DP16402 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1DP16402 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1DP16402 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1DP16402 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1DP16402 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1DP16402 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 KRT19P2-202ENST00000557173 1012 ntBASIC13.4□□□□□ -0.26
HIST1H1DP16402 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1DP16402 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 AJ011931.1-201ENST00000618749 2492 ntBASIC13.4□□□□□ -0.26
HIST1H1DP16402 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1DP16402 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1DP16402 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1DP16402 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1DP16402 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1DP16402 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H1DP16402 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1DP16402 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1DP16402 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.4□□□□□ -0.27
HIST1H1DP16402 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
HIST1H1DP16402 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
HIST1H1DP16402 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.39□□□□□ -0.27
HIST1H1DP16402 AC079776.4-201ENST00000511039 504 ntBASIC13.39□□□□□ -0.27
HIST1H1DP16402 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 AL138918.1-201ENST00000568306 659 ntBASIC13.39□□□□□ -0.27
HIST1H1DP16402 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 AC068137.2-201ENST00000605408 478 ntBASIC13.39□□□□□ -0.27
HIST1H1DP16402 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms