Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
COL11A1P12107 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL11A1P12107 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL11A1P12107 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL11A1P12107 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.53■□□□□ 0.4
COL11A1P12107 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL11A1P12107 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL11A1P12107 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL11A1P12107 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL11A1P12107 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.52■□□□□ 0.4
COL11A1P12107 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL11A1P12107 TNRC18P3-201ENST00000441896 2691 ntBASIC17.52■□□□□ 0.4
COL11A1P12107 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL11A1P12107 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL11A1P12107 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL11A1P12107 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL11A1P12107 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL11A1P12107 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.52■□□□□ 0.4
COL11A1P12107 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.52■□□□□ 0.4
COL11A1P12107 AC013355.1-201ENST00000562625 723 ntBASIC17.52■□□□□ 0.4
COL11A1P12107 RN7SL48P-201ENST00000579283 293 ntBASIC17.52■□□□□ 0.4
COL11A1P12107 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
COL11A1P12107 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL11A1P12107 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.52■□□□□ 0.4
COL11A1P12107 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.52■□□□□ 0.4
COL11A1P12107 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL11A1P12107 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
COL11A1P12107 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.52■□□□□ 0.4
COL11A1P12107 AL513523.2-202ENST00000427283 2040 ntBASIC17.52■□□□□ 0.4
COL11A1P12107 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL11A1P12107 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL11A1P12107 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL11A1P12107 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
COL11A1P12107 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
COL11A1P12107 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL11A1P12107 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL11A1P12107 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COL11A1P12107 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL11A1P12107 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL11A1P12107 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.52■□□□□ 0.39
COL11A1P12107 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL11A1P12107 AL139384.1-201ENST00000612143 3047 ntBASIC17.51■□□□□ 0.39
COL11A1P12107 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL11A1P12107 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
COL11A1P12107 RN7SKP175-201ENST00000408472 289 ntBASIC17.51■□□□□ 0.39
COL11A1P12107 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.51■□□□□ 0.39
COL11A1P12107 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL11A1P12107 AC100850.1-201ENST00000506768 649 ntBASIC17.51■□□□□ 0.39
COL11A1P12107 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.51■□□□□ 0.39
COL11A1P12107 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.51■□□□□ 0.39
COL11A1P12107 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.51■□□□□ 0.39
COL11A1P12107 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.51■□□□□ 0.39
COL11A1P12107 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.51■□□□□ 0.39
COL11A1P12107 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.51■□□□□ 0.39
COL11A1P12107 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL11A1P12107 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL11A1P12107 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL11A1P12107 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
COL11A1P12107 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL11A1P12107 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.51■□□□□ 0.39
COL11A1P12107 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
COL11A1P12107 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.51■□□□□ 0.39
COL11A1P12107 AL157414.3-201ENST00000624276 1954 ntBASIC17.51■□□□□ 0.39
COL11A1P12107 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL11A1P12107 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.51■□□□□ 0.39
COL11A1P12107 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL11A1P12107 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
COL11A1P12107 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.51■□□□□ 0.39
COL11A1P12107 AL118508.1-201ENST00000613502 2345 ntBASIC17.51■□□□□ 0.39
COL11A1P12107 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL11A1P12107 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
COL11A1P12107 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
COL11A1P12107 AC004898.1-201ENST00000451057 766 ntBASIC17.51■□□□□ 0.39
COL11A1P12107 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.51■□□□□ 0.39
COL11A1P12107 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.51■□□□□ 0.39
COL11A1P12107 AC023310.1-201ENST00000554836 735 ntBASIC17.51■□□□□ 0.39
COL11A1P12107 RHOQP1-201ENST00000555758 579 ntBASIC17.51■□□□□ 0.39
COL11A1P12107 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.51■□□□□ 0.39
COL11A1P12107 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL11A1P12107 CICP13-201ENST00000422015 2789 ntBASIC17.51■□□□□ 0.39
COL11A1P12107 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.51■□□□□ 0.39
COL11A1P12107 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
COL11A1P12107 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL11A1P12107 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.51■□□□□ 0.39
COL11A1P12107 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.51■□□□□ 0.39
COL11A1P12107 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.51■□□□□ 0.39
COL11A1P12107 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL11A1P12107 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL11A1P12107 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
COL11A1P12107 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
COL11A1P12107 MST1L-201ENST00000442552 2185 ntBASIC17.5■□□□□ 0.39
COL11A1P12107 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.5■□□□□ 0.39
COL11A1P12107 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL11A1P12107 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.5■□□□□ 0.39
COL11A1P12107 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.5■□□□□ 0.39
COL11A1P12107 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.5■□□□□ 0.39
COL11A1P12107 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
COL11A1P12107 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL11A1P12107 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.5■□□□□ 0.39
COL11A1P12107 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms