Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.5■□□□□ 0.55
TOP1P11387 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TOP1P11387 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TOP1P11387 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TOP1P11387 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.5■□□□□ 0.55
TOP1P11387 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.5■□□□□ 0.55
TOP1P11387 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.5■□□□□ 0.55
TOP1P11387 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.5■□□□□ 0.55
TOP1P11387 KRT18P64-201ENST00000434946 1219 ntBASIC18.5■□□□□ 0.55
TOP1P11387 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.5■□□□□ 0.55
TOP1P11387 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TOP1P11387 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.5■□□□□ 0.55
TOP1P11387 SLED1-202ENST00000512051 380 ntBASIC18.5■□□□□ 0.55
TOP1P11387 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TOP1P11387 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.5■□□□□ 0.55
TOP1P11387 RARRES2P5-201ENST00000564013 466 ntBASIC18.5■□□□□ 0.55
TOP1P11387 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.5■□□□□ 0.55
TOP1P11387 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
TOP1P11387 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.5■□□□□ 0.55
TOP1P11387 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TOP1P11387 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TOP1P11387 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TOP1P11387 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TOP1P11387 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TOP1P11387 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TOP1P11387 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TOP1P11387 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.49■□□□□ 0.55
TOP1P11387 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TOP1P11387 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.49■□□□□ 0.55
TOP1P11387 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TOP1P11387 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TOP1P11387 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TOP1P11387 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TOP1P11387 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.49■□□□□ 0.55
TOP1P11387 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.49■□□□□ 0.55
TOP1P11387 TOMM22P5-201ENST00000416399 439 ntBASIC18.49■□□□□ 0.55
TOP1P11387 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.49■□□□□ 0.55
TOP1P11387 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TOP1P11387 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TOP1P11387 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.49■□□□□ 0.55
TOP1P11387 RRP7BP-205ENST00000566851 833 ntBASIC18.49■□□□□ 0.55
TOP1P11387 MIR4313-201ENST00000580760 101 ntBASIC18.49■□□□□ 0.55
TOP1P11387 AL391069.4-201ENST00000609583 481 ntBASIC18.49■□□□□ 0.55
TOP1P11387 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.49■□□□□ 0.55
TOP1P11387 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TOP1P11387 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TOP1P11387 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TOP1P11387 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TOP1P11387 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TOP1P11387 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TOP1P11387 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TOP1P11387 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
TOP1P11387 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TOP1P11387 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.48■□□□□ 0.55
TOP1P11387 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TOP1P11387 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TOP1P11387 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
TOP1P11387 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TOP1P11387 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TOP1P11387 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TOP1P11387 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.48■□□□□ 0.55
TOP1P11387 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TOP1P11387 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.48■□□□□ 0.55
TOP1P11387 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
TOP1P11387 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TOP1P11387 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.48■□□□□ 0.55
TOP1P11387 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.48■□□□□ 0.55
TOP1P11387 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.48■□□□□ 0.55
TOP1P11387 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.48■□□□□ 0.55
TOP1P11387 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.48■□□□□ 0.55
TOP1P11387 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.48■□□□□ 0.55
TOP1P11387 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.48■□□□□ 0.55
TOP1P11387 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.48■□□□□ 0.55
TOP1P11387 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TOP1P11387 AL358472.5-202ENST00000641448 1267 ntBASIC18.48■□□□□ 0.55
TOP1P11387 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TOP1P11387 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TOP1P11387 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TOP1P11387 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TOP1P11387 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TOP1P11387 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
TOP1P11387 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TOP1P11387 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TOP1P11387 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.48■□□□□ 0.55
TOP1P11387 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TOP1P11387 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP1P11387 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.47■□□□□ 0.55
TOP1P11387 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP1P11387 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TOP1P11387 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TOP1P11387 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP1P11387 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.47■□□□□ 0.55
TOP1P11387 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP1P11387 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP1P11387 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP1P11387 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP1P11387 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.47■□□□□ 0.55
TOP1P11387 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
TOP1P11387 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP1P11387 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms