Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC20.69■□□□□ 0.9
CSB-PGBD3P0DP91 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC20.69■□□□□ 0.9
CSB-PGBD3P0DP91 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC20.69■□□□□ 0.9
CSB-PGBD3P0DP91 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CSB-PGBD3P0DP91 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CSB-PGBD3P0DP91 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC20.69■□□□□ 0.9
CSB-PGBD3P0DP91 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20.69■□□□□ 0.9
CSB-PGBD3P0DP91 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CSB-PGBD3P0DP91 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 PTPA-218ENST00000435132 618 ntTSL 2 BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 BX284668.4-201ENST00000453917 508 ntBASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 UBL5-208ENST00000593087 320 ntTSL 3 BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSB-PGBD3P0DP91 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 AMT-233ENST00000636522 1620 ntTSL 2 BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 CD8B2-202ENST00000417670 633 ntBASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSB-PGBD3P0DP91 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 FLJ38576-201ENST00000623820 2459 ntBASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 AL662890.1-201ENST00000396818 632 ntBASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 ACTBP8-201ENST00000403258 1108 ntBASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 PARP8-206ENST00000503665 572 ntTSL 4 BASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CSB-PGBD3P0DP91 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSB-PGBD3P0DP91 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSB-PGBD3P0DP91 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.65■□□□□ 0.9
CSB-PGBD3P0DP91 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSB-PGBD3P0DP91 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSB-PGBD3P0DP91 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSB-PGBD3P0DP91 AC018735.1-201ENST00000437208 1502 ntBASIC20.65■□□□□ 0.9
CSB-PGBD3P0DP91 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms