Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SP9P0CG40 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
SP9P0CG40 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SP9P0CG40 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.24■□□□□ 0.03
SP9P0CG40 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.24■□□□□ 0.03
SP9P0CG40 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SP9P0CG40 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SP9P0CG40 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.24■□□□□ 0.03
SP9P0CG40 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.24■□□□□ 0.03
SP9P0CG40 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SP9P0CG40 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.23■□□□□ 0.03
SP9P0CG40 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SP9P0CG40 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SP9P0CG40 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SP9P0CG40 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP9P0CG40 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP9P0CG40 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SP9P0CG40 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP9P0CG40 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP9P0CG40 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SP9P0CG40 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP9P0CG40 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SP9P0CG40 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP9P0CG40 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP9P0CG40 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP9P0CG40 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.23■□□□□ 0.03
SP9P0CG40 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SP9P0CG40 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.23■□□□□ 0.03
SP9P0CG40 MIR4754-201ENST00000582477 89 ntBASIC15.23■□□□□ 0.03
SP9P0CG40 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.23■□□□□ 0.03
SP9P0CG40 AC103810.10-201ENST00000606504 343 ntBASIC15.23■□□□□ 0.03
SP9P0CG40 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
SP9P0CG40 NAP1L6-202ENST00000641404 1222 ntBASIC15.23■□□□□ 0.03
SP9P0CG40 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.23■□□□□ 0.03
SP9P0CG40 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SP9P0CG40 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SP9P0CG40 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
SP9P0CG40 TBC1D3J-201ENST00000620719 1426 ntBASIC15.23■□□□□ 0.03
SP9P0CG40 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP9P0CG40 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
SP9P0CG40 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.23■□□□□ 0.03
SP9P0CG40 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP9P0CG40 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.23■□□□□ 0.03
SP9P0CG40 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SP9P0CG40 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.23■□□□□ 0.03
SP9P0CG40 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP9P0CG40 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SP9P0CG40 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SP9P0CG40 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SP9P0CG40 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP9P0CG40 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP9P0CG40 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.22■□□□□ 0.03
SP9P0CG40 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.22■□□□□ 0.03
SP9P0CG40 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP9P0CG40 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.22■□□□□ 0.03
SP9P0CG40 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SP9P0CG40 AL627231.1-201ENST00000394467 1125 ntBASIC15.22■□□□□ 0.03
SP9P0CG40 AC073150.1-201ENST00000450406 1084 ntBASIC15.22■□□□□ 0.03
SP9P0CG40 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.22■□□□□ 0.03
SP9P0CG40 RPL18P13-201ENST00000478088 569 ntBASIC15.22■□□□□ 0.03
SP9P0CG40 AC004066.1-201ENST00000502488 802 ntBASIC15.22■□□□□ 0.03
SP9P0CG40 AL160314.3-201ENST00000556041 767 ntBASIC15.22■□□□□ 0.03
SP9P0CG40 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.22■□□□□ 0.03
SP9P0CG40 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SP9P0CG40 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.22■□□□□ 0.03
SP9P0CG40 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.22■□□□□ 0.03
SP9P0CG40 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.22■□□□□ 0.03
SP9P0CG40 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.22■□□□□ 0.03
SP9P0CG40 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.22■□□□□ 0.03
SP9P0CG40 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.22■□□□□ 0.03
SP9P0CG40 AC051619.9-201ENST00000623237 597 ntBASIC15.22■□□□□ 0.03
SP9P0CG40 AL162426.1-201ENST00000624141 743 ntBASIC15.22■□□□□ 0.03
SP9P0CG40 AC105020.1-201ENST00000435356 2205 ntBASIC15.22■□□□□ 0.03
SP9P0CG40 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP9P0CG40 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP9P0CG40 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SP9P0CG40 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP9P0CG40 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP9P0CG40 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP9P0CG40 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.22■□□□□ 0.03
SP9P0CG40 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SP9P0CG40 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.22■□□□□ 0.03
SP9P0CG40 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.22■□□□□ 0.03
SP9P0CG40 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP9P0CG40 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SP9P0CG40 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SP9P0CG40 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SP9P0CG40 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.21■□□□□ 0.03
SP9P0CG40 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.21■□□□□ 0.03
SP9P0CG40 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP9P0CG40 AC007787.1-201ENST00000588095 1583 ntBASIC15.21■□□□□ 0.03
SP9P0CG40 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP9P0CG40 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms