Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CAPN1P07384 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPN1P07384 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CAPN1P07384 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPN1P07384 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CAPN1P07384 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.57■□□□□ 0.08
CAPN1P07384 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.57■□□□□ 0.08
CAPN1P07384 AC092580.3-201ENST00000430932 139 ntBASIC15.57■□□□□ 0.08
CAPN1P07384 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPN1P07384 UGT1A2P-201ENST00000454886 866 ntBASIC15.57■□□□□ 0.08
CAPN1P07384 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.57■□□□□ 0.08
CAPN1P07384 INGX-202ENST00000489074 768 ntBASIC15.57■□□□□ 0.08
CAPN1P07384 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.57■□□□□ 0.08
CAPN1P07384 RARRES2P9-201ENST00000565168 469 ntBASIC15.57■□□□□ 0.08
CAPN1P07384 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPN1P07384 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.57■□□□□ 0.08
CAPN1P07384 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.57■□□□□ 0.08
CAPN1P07384 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPN1P07384 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.57■□□□□ 0.08
CAPN1P07384 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.57■□□□□ 0.08
CAPN1P07384 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CAPN1P07384 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPN1P07384 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.57■□□□□ 0.08
CAPN1P07384 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
CAPN1P07384 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.57■□□□□ 0.08
CAPN1P07384 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.57■□□□□ 0.08
CAPN1P07384 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.56■□□□□ 0.08
CAPN1P07384 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.56■□□□□ 0.08
CAPN1P07384 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN1P07384 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN1P07384 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN1P07384 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN1P07384 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CAPN1P07384 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CAPN1P07384 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CAPN1P07384 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN1P07384 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN1P07384 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CAPN1P07384 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CAPN1P07384 MIR661-201ENST00000384842 89 ntBASIC15.56■□□□□ 0.08
CAPN1P07384 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN1P07384 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CAPN1P07384 AC069120.2-201ENST00000524091 540 ntBASIC15.56■□□□□ 0.08
CAPN1P07384 AC061975.2-201ENST00000581722 295 ntBASIC15.56■□□□□ 0.08
CAPN1P07384 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.56■□□□□ 0.08
CAPN1P07384 AC138761.1-201ENST00000584393 385 ntBASIC15.56■□□□□ 0.08
CAPN1P07384 AC018529.1-201ENST00000613063 361 ntBASIC15.56■□□□□ 0.08
CAPN1P07384 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN1P07384 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN1P07384 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN1P07384 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CAPN1P07384 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.56■□□□□ 0.08
CAPN1P07384 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
CAPN1P07384 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN1P07384 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN1P07384 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.56■□□□□ 0.08
CAPN1P07384 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.56■□□□□ 0.08
CAPN1P07384 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.56■□□□□ 0.08
CAPN1P07384 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN1P07384 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN1P07384 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CAPN1P07384 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CAPN1P07384 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN1P07384 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN1P07384 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN1P07384 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.56■□□□□ 0.08
CAPN1P07384 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CAPN1P07384 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CAPN1P07384 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN1P07384 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CAPN1P07384 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.55■□□□□ 0.08
CAPN1P07384 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.55■□□□□ 0.08
CAPN1P07384 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.55■□□□□ 0.08
CAPN1P07384 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.55■□□□□ 0.08
CAPN1P07384 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.55■□□□□ 0.08
CAPN1P07384 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.55■□□□□ 0.08
CAPN1P07384 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN1P07384 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms