Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 AC004790.1-201ENST00000612686 536 ntBASIC15.95■□□□□ 0.14
HLA-DQB2P05538 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 C18orf15-201ENST00000623680 2534 ntBASIC15.95■□□□□ 0.14
HLA-DQB2P05538 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 FAM8A3P-201ENST00000427218 844 ntBASIC15.94■□□□□ 0.14
HLA-DQB2P05538 AL589987.1-201ENST00000453380 819 ntBASIC15.94■□□□□ 0.14
HLA-DQB2P05538 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 AC135586.1-201ENST00000539323 574 ntBASIC15.94■□□□□ 0.14
HLA-DQB2P05538 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 BTBD7P1-201ENST00000447253 1453 ntBASIC15.94■□□□□ 0.14
HLA-DQB2P05538 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQB2P05538 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 MIR770-201ENST00000390219 98 ntBASIC15.93■□□□□ 0.14
HLA-DQB2P05538 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.93■□□□□ 0.14
HLA-DQB2P05538 UGT1A2P-201ENST00000454886 866 ntBASIC15.93■□□□□ 0.14
HLA-DQB2P05538 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 AC092337.1-201ENST00000568699 1129 ntBASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms