Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR3DP05423 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
POLR3DP05423 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
POLR3DP05423 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR3DP05423 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR3DP05423 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
POLR3DP05423 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
POLR3DP05423 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
POLR3DP05423 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR3DP05423 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
POLR3DP05423 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR3DP05423 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLR3DP05423 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
POLR3DP05423 AC112504.1-201ENST00000623415 1841 ntBASIC18.81■□□□□ 0.6
POLR3DP05423 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
POLR3DP05423 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.81■□□□□ 0.6
POLR3DP05423 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.81■□□□□ 0.6
POLR3DP05423 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR3DP05423 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.81■□□□□ 0.6
POLR3DP05423 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR3DP05423 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR3DP05423 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLR3DP05423 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR3DP05423 GK-202ENST00000378941 458 ntTSL 3 BASIC18.81■□□□□ 0.6
POLR3DP05423 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR3DP05423 AC136604.1-201ENST00000418535 575 ntBASIC18.81■□□□□ 0.6
POLR3DP05423 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
POLR3DP05423 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.81■□□□□ 0.6
POLR3DP05423 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR3DP05423 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.81■□□□□ 0.6
POLR3DP05423 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR3DP05423 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.81■□□□□ 0.6
POLR3DP05423 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.81■□□□□ 0.6
POLR3DP05423 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLR3DP05423 AC036164.1-201ENST00000570544 333 ntBASIC18.81■□□□□ 0.6
POLR3DP05423 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.81■□□□□ 0.6
POLR3DP05423 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLR3DP05423 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
POLR3DP05423 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR3DP05423 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.81■□□□□ 0.6
POLR3DP05423 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR3DP05423 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR3DP05423 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
POLR3DP05423 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR3DP05423 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR3DP05423 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLR3DP05423 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLR3DP05423 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
POLR3DP05423 AL607033.1-201ENST00000623900 1599 ntBASIC18.81■□□□□ 0.6
POLR3DP05423 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR3DP05423 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR3DP05423 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR3DP05423 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR3DP05423 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR3DP05423 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR3DP05423 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR3DP05423 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
POLR3DP05423 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR3DP05423 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
POLR3DP05423 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.8■□□□□ 0.6
POLR3DP05423 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
POLR3DP05423 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR3DP05423 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.8■□□□□ 0.6
POLR3DP05423 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR3DP05423 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
POLR3DP05423 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
POLR3DP05423 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.8■□□□□ 0.6
POLR3DP05423 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.8■□□□□ 0.6
POLR3DP05423 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.8■□□□□ 0.6
POLR3DP05423 SLED1-202ENST00000512051 380 ntBASIC18.8■□□□□ 0.6
POLR3DP05423 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
POLR3DP05423 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
POLR3DP05423 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
POLR3DP05423 AC132938.2-201ENST00000579188 680 ntBASIC18.8■□□□□ 0.6
POLR3DP05423 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.8■□□□□ 0.6
POLR3DP05423 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.8■□□□□ 0.6
POLR3DP05423 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
POLR3DP05423 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
POLR3DP05423 AC097359.3-201ENST00000603982 1210 ntBASIC18.8■□□□□ 0.6
POLR3DP05423 TMEM261P1-201ENST00000604899 340 ntBASIC18.8■□□□□ 0.6
POLR3DP05423 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.8■□□□□ 0.6
POLR3DP05423 AL591163.1-201ENST00000641757 987 ntBASIC18.8■□□□□ 0.6
POLR3DP05423 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR3DP05423 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.8■□□□□ 0.6
POLR3DP05423 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR3DP05423 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.8■□□□□ 0.6
POLR3DP05423 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR3DP05423 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.8■□□□□ 0.6
POLR3DP05423 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR3DP05423 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR3DP05423 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.8■□□□□ 0.6
POLR3DP05423 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.79■□□□□ 0.6
POLR3DP05423 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR3DP05423 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR3DP05423 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR3DP05423 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
POLR3DP05423 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR3DP05423 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR3DP05423 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
POLR3DP05423 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms