Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA1P02708 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CHRNA1P02708 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
CHRNA1P02708 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.97■□□□□ 0.31
CHRNA1P02708 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA1P02708 AHCYP2-201ENST00000430630 1300 ntBASIC16.96■□□□□ 0.31
CHRNA1P02708 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CHRNA1P02708 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.96■□□□□ 0.31
CHRNA1P02708 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.96■□□□□ 0.31
CHRNA1P02708 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CHRNA1P02708 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 KLF2P2-201ENST00000416807 1039 ntBASIC16.96■□□□□ 0.31
CHRNA1P02708 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CHRNA1P02708 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.96■□□□□ 0.31
CHRNA1P02708 RNA5SP486-201ENST00000515961 83 ntBASIC16.96■□□□□ 0.31
CHRNA1P02708 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.96■□□□□ 0.31
CHRNA1P02708 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.96■□□□□ 0.31
CHRNA1P02708 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.96■□□□□ 0.31
CHRNA1P02708 AC243960.2-201ENST00000600996 747 ntBASIC16.96■□□□□ 0.31
CHRNA1P02708 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.96■□□□□ 0.31
CHRNA1P02708 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.96■□□□□ 0.31
CHRNA1P02708 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.96■□□□□ 0.31
CHRNA1P02708 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.96■□□□□ 0.31
CHRNA1P02708 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA1P02708 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CHRNA1P02708 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHRNA1P02708 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.96■□□□□ 0.3
CHRNA1P02708 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CHRNA1P02708 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CHRNA1P02708 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
CHRNA1P02708 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CHRNA1P02708 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 AC148477.4-201ENST00000613430 1793 ntBASIC16.95■□□□□ 0.3
CHRNA1P02708 AC022188.1-201ENST00000620960 1664 ntBASIC16.95■□□□□ 0.3
CHRNA1P02708 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 ACTBP8-201ENST00000403258 1108 ntBASIC16.95■□□□□ 0.3
CHRNA1P02708 MIR1202-201ENST00000408529 83 ntBASIC16.95■□□□□ 0.3
CHRNA1P02708 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.95■□□□□ 0.3
CHRNA1P02708 AC114812.1-204ENST00000449669 728 ntBASIC16.95■□□□□ 0.3
CHRNA1P02708 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.95■□□□□ 0.3
CHRNA1P02708 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.95■□□□□ 0.3
CHRNA1P02708 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.95■□□□□ 0.3
CHRNA1P02708 AL118558.3-201ENST00000607414 1079 ntBASIC16.95■□□□□ 0.3
CHRNA1P02708 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
CHRNA1P02708 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.95■□□□□ 0.3
CHRNA1P02708 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.95■□□□□ 0.3
CHRNA1P02708 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA1P02708 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CHRNA1P02708 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA1P02708 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CHRNA1P02708 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.94■□□□□ 0.3
CHRNA1P02708 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA1P02708 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA1P02708 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA1P02708 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms