Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOC1P02654 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOC1P02654 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOC1P02654 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
APOC1P02654 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.02□□□□□ -0.17
APOC1P02654 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.02□□□□□ -0.17
APOC1P02654 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
APOC1P02654 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOC1P02654 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APOC1P02654 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOC1P02654 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APOC1P02654 SNX18-202ENST00000343017 3140 ntBASIC14.01□□□□□ -0.17
APOC1P02654 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.01□□□□□ -0.17
APOC1P02654 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.01□□□□□ -0.17
APOC1P02654 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.01□□□□□ -0.17
APOC1P02654 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.01□□□□□ -0.17
APOC1P02654 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.01□□□□□ -0.17
APOC1P02654 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
APOC1P02654 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
APOC1P02654 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
APOC1P02654 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 YBX2P1-201ENST00000394192 760 ntBASIC14.01□□□□□ -0.17
APOC1P02654 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.01□□□□□ -0.17
APOC1P02654 AC142381.1-201ENST00000426099 345 ntBASIC14.01□□□□□ -0.17
APOC1P02654 AC004832.2-201ENST00000426397 482 ntBASIC14.01□□□□□ -0.17
APOC1P02654 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.01□□□□□ -0.17
APOC1P02654 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.01□□□□□ -0.17
APOC1P02654 AL139010.1-201ENST00000454878 894 ntBASIC14.01□□□□□ -0.17
APOC1P02654 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.01□□□□□ -0.17
APOC1P02654 AL121894.2-201ENST00000602977 491 ntBASIC14.01□□□□□ -0.17
APOC1P02654 AL359183.1-201ENST00000623796 2132 ntBASIC14.01□□□□□ -0.17
APOC1P02654 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.01□□□□□ -0.17
APOC1P02654 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.01□□□□□ -0.17
APOC1P02654 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
APOC1P02654 AC092902.6-201ENST00000641783 218 ntBASIC14.01□□□□□ -0.17
APOC1P02654 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
APOC1P02654 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
APOC1P02654 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.01□□□□□ -0.17
APOC1P02654 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC1P02654 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
APOC1P02654 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC1P02654 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC1P02654 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOC1P02654 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOC1P02654 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
APOC1P02654 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
APOC1P02654 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14□□□□□ -0.17
APOC1P02654 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC1P02654 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC1P02654 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
APOC1P02654 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14□□□□□ -0.17
APOC1P02654 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOC1P02654 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC1P02654 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC1P02654 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
APOC1P02654 MIR346-201ENST00000362234 95 ntBASIC14□□□□□ -0.17
APOC1P02654 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14□□□□□ -0.17
APOC1P02654 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC1P02654 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14□□□□□ -0.17
APOC1P02654 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC1P02654 AC023274.1-201ENST00000418278 595 ntBASIC14□□□□□ -0.17
APOC1P02654 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
APOC1P02654 NMU-202ENST00000505262 693 ntTSL 3 BASIC14□□□□□ -0.17
APOC1P02654 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14□□□□□ -0.17
APOC1P02654 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14□□□□□ -0.17
APOC1P02654 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14□□□□□ -0.17
APOC1P02654 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14□□□□□ -0.17
APOC1P02654 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
APOC1P02654 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14□□□□□ -0.17
APOC1P02654 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
APOC1P02654 AC055717.3-201ENST00000622967 595 ntBASIC14□□□□□ -0.17
APOC1P02654 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC1P02654 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14□□□□□ -0.17
APOC1P02654 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
APOC1P02654 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms