Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
SH2D1AO60880 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
SH2D1AO60880 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.51
SH2D1AO60880 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.83□□□□□ -0.52
SH2D1AO60880 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 GRK6P1-201ENST00000400595 1711 ntBASIC11.83□□□□□ -0.52
SH2D1AO60880 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC11.83□□□□□ -0.52
SH2D1AO60880 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC11.83□□□□□ -0.52
SH2D1AO60880 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
SH2D1AO60880 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SH2D1AO60880 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SH2D1AO60880 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC11.83□□□□□ -0.52
SH2D1AO60880 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC11.83□□□□□ -0.52
SH2D1AO60880 DDT-204ENST00000404092 805 ntTSL 3 BASIC11.83□□□□□ -0.52
SH2D1AO60880 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 SLC4A1APP2-201ENST00000424054 1259 ntBASIC11.83□□□□□ -0.52
SH2D1AO60880 AL645939.2-201ENST00000427340 991 ntBASIC11.83□□□□□ -0.52
SH2D1AO60880 HCG4P8-203ENST00000443049 980 ntBASIC11.83□□□□□ -0.52
SH2D1AO60880 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC11.83□□□□□ -0.52
SH2D1AO60880 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SH2D1AO60880 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC11.83□□□□□ -0.52
SH2D1AO60880 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.83□□□□□ -0.52
SH2D1AO60880 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.83□□□□□ -0.52
SH2D1AO60880 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.83□□□□□ -0.52
SH2D1AO60880 AC012640.2-201ENST00000561606 901 ntBASIC11.83□□□□□ -0.52
SH2D1AO60880 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC11.83□□□□□ -0.52
SH2D1AO60880 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.83□□□□□ -0.52
SH2D1AO60880 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.83□□□□□ -0.52
SH2D1AO60880 PRR29-207ENST00000580752 458 ntTSL 3 BASIC11.83□□□□□ -0.52
SH2D1AO60880 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC11.83□□□□□ -0.52
SH2D1AO60880 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
SH2D1AO60880 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SH2D1AO60880 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC11.83□□□□□ -0.52
SH2D1AO60880 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC11.83□□□□□ -0.52
SH2D1AO60880 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.83□□□□□ -0.52
SH2D1AO60880 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SH2D1AO60880 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC11.83□□□□□ -0.52
SH2D1AO60880 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC11.83□□□□□ -0.52
SH2D1AO60880 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 REXO1L1P-202ENST00000608646 1974 ntBASIC11.83□□□□□ -0.52
SH2D1AO60880 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SH2D1AO60880 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SH2D1AO60880 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SH2D1AO60880 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC11.83□□□□□ -0.52
SH2D1AO60880 STRN-202ENST00000379213 2254 ntTSL 5 BASIC11.83□□□□□ -0.52
SH2D1AO60880 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SH2D1AO60880 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.83□□□□□ -0.52
SH2D1AO60880 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SH2D1AO60880 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC11.82□□□□□ -0.52
SH2D1AO60880 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC11.82□□□□□ -0.52
SH2D1AO60880 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SH2D1AO60880 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
SH2D1AO60880 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SH2D1AO60880 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SH2D1AO60880 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SH2D1AO60880 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SH2D1AO60880 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SH2D1AO60880 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SH2D1AO60880 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SH2D1AO60880 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SH2D1AO60880 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SH2D1AO60880 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SH2D1AO60880 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SH2D1AO60880 UCKL1-AS1-201ENST00000623569 3602 ntBASIC11.82□□□□□ -0.52
SH2D1AO60880 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SH2D1AO60880 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SH2D1AO60880 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SH2D1AO60880 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SH2D1AO60880 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.82□□□□□ -0.52
SH2D1AO60880 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC11.82□□□□□ -0.52
SH2D1AO60880 AC092474.2-201ENST00000424288 719 ntBASIC11.82□□□□□ -0.52
SH2D1AO60880 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC11.82□□□□□ -0.52
SH2D1AO60880 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SH2D1AO60880 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SH2D1AO60880 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SH2D1AO60880 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms