Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.7■□□□□ 0.42
CHMP2AO43633 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.7■□□□□ 0.42
CHMP2AO43633 AC123567.1-201ENST00000548294 1261 ntBASIC17.7■□□□□ 0.42
CHMP2AO43633 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.7■□□□□ 0.42
CHMP2AO43633 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP2AO43633 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.7■□□□□ 0.42
CHMP2AO43633 AC025048.6-201ENST00000634326 1161 ntBASIC17.7■□□□□ 0.42
CHMP2AO43633 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
CHMP2AO43633 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP2AO43633 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.7■□□□□ 0.42
CHMP2AO43633 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP2AO43633 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CHMP2AO43633 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP2AO43633 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP2AO43633 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.7■□□□□ 0.42
CHMP2AO43633 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP2AO43633 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP2AO43633 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP2AO43633 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP2AO43633 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP2AO43633 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP2AO43633 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP2AO43633 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CHMP2AO43633 AL391825.1-201ENST00000457671 1364 ntBASIC17.69■□□□□ 0.42
CHMP2AO43633 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CHMP2AO43633 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP2AO43633 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP2AO43633 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP2AO43633 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CHMP2AO43633 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP2AO43633 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP2AO43633 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP2AO43633 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP2AO43633 AC098850.1-201ENST00000419919 790 ntBASIC17.69■□□□□ 0.42
CHMP2AO43633 MEP1AP4-201ENST00000423244 1087 ntBASIC17.69■□□□□ 0.42
CHMP2AO43633 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHMP2AO43633 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP2AO43633 RARRES2P5-201ENST00000564013 466 ntBASIC17.69■□□□□ 0.42
CHMP2AO43633 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP2AO43633 TP53TG3HP-202ENST00000569755 579 ntBASIC17.69■□□□□ 0.42
CHMP2AO43633 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.69■□□□□ 0.42
CHMP2AO43633 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CHMP2AO43633 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP2AO43633 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.69■□□□□ 0.42
CHMP2AO43633 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP2AO43633 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP2AO43633 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP2AO43633 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CHMP2AO43633 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CHMP2AO43633 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.68■□□□□ 0.42
CHMP2AO43633 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CHMP2AO43633 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP2AO43633 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP2AO43633 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.68■□□□□ 0.42
CHMP2AO43633 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP2AO43633 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP2AO43633 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP2AO43633 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP2AO43633 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.68■□□□□ 0.42
CHMP2AO43633 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP2AO43633 DGCR5-201ENST00000399539 862 ntBASIC17.68■□□□□ 0.42
CHMP2AO43633 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.68■□□□□ 0.42
CHMP2AO43633 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP2AO43633 MYCLP2-201ENST00000449268 967 ntBASIC17.68■□□□□ 0.42
CHMP2AO43633 RN7SL692P-201ENST00000464677 288 ntBASIC17.68■□□□□ 0.42
CHMP2AO43633 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP2AO43633 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.68■□□□□ 0.42
CHMP2AO43633 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.68■□□□□ 0.42
CHMP2AO43633 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP2AO43633 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.68■□□□□ 0.42
CHMP2AO43633 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP2AO43633 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.68■□□□□ 0.42
CHMP2AO43633 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.68■□□□□ 0.42
CHMP2AO43633 AC027307.3-201ENST00000594262 1100 ntBASIC17.68■□□□□ 0.42
CHMP2AO43633 MIR8072-201ENST00000614241 80 ntBASIC17.68■□□□□ 0.42
CHMP2AO43633 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.68■□□□□ 0.42
CHMP2AO43633 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP2AO43633 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP2AO43633 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP2AO43633 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP2AO43633 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP2AO43633 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP2AO43633 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP2AO43633 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP2AO43633 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.67■□□□□ 0.42
CHMP2AO43633 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CHMP2AO43633 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP2AO43633 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.67■□□□□ 0.42
CHMP2AO43633 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP2AO43633 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP2AO43633 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP2AO43633 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP2AO43633 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.67■□□□□ 0.42
CHMP2AO43633 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.67■□□□□ 0.42
CHMP2AO43633 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP2AO43633 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP2AO43633 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP2AO43633 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP2AO43633 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.67■□□□□ 0.42
CHMP2AO43633 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms