Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 AC092648.1-201ENST00000425870 423 ntBASIC22.12■■□□□ 1.13
MSH5O43196 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC22.12■■□□□ 1.13
MSH5O43196 AL592309.1-201ENST00000443127 649 ntBASIC22.12■■□□□ 1.13
MSH5O43196 ELOCP13-201ENST00000443934 329 ntBASIC22.12■■□□□ 1.13
MSH5O43196 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC22.12■■□□□ 1.13
MSH5O43196 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
MSH5O43196 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC22.12■■□□□ 1.13
MSH5O43196 IGHV3-42-201ENST00000520410 361 ntBASIC22.12■■□□□ 1.13
MSH5O43196 AP002761.2-201ENST00000541254 618 ntTSL 3 BASIC22.12■■□□□ 1.13
MSH5O43196 IZUMO3-202ENST00000543880 1229 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
MSH5O43196 AL163195.2-203ENST00000553604 573 ntTSL 4 BASIC22.12■■□□□ 1.13
MSH5O43196 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC22.12■■□□□ 1.13
MSH5O43196 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC22.12■■□□□ 1.13
MSH5O43196 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC22.12■■□□□ 1.13
MSH5O43196 SETP3-201ENST00000581726 813 ntBASIC22.12■■□□□ 1.13
MSH5O43196 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC22.12■■□□□ 1.13
MSH5O43196 AC019129.2-201ENST00000609837 1235 ntBASIC22.12■■□□□ 1.13
MSH5O43196 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC22.12■■□□□ 1.13
MSH5O43196 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
MSH5O43196 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
MSH5O43196 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
MSH5O43196 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC22.12■■□□□ 1.13
MSH5O43196 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
MSH5O43196 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
MSH5O43196 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
MSH5O43196 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MSH5O43196 AC092384.3-202ENST00000564646 2873 ntBASIC22.12■■□□□ 1.13
MSH5O43196 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC22.12■■□□□ 1.13
MSH5O43196 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC22.11■■□□□ 1.13
MSH5O43196 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC22.11■■□□□ 1.13
MSH5O43196 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
MSH5O43196 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
MSH5O43196 CASC20-201ENST00000415932 1484 ntTSL 5 BASIC22.11■■□□□ 1.13
MSH5O43196 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MSH5O43196 ARHGDIB-201ENST00000228945 1256 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MSH5O43196 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MSH5O43196 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
MSH5O43196 ZNF684-202ENST00000372697 1028 ntTSL 3 BASIC22.11■■□□□ 1.13
MSH5O43196 AC002056.1-201ENST00000395613 760 ntBASIC22.11■■□□□ 1.13
MSH5O43196 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC22.11■■□□□ 1.13
MSH5O43196 Y_RNA.599-201ENST00000410489 109 ntBASIC22.11■■□□□ 1.13
MSH5O43196 DNAJA1P1-201ENST00000425106 1187 ntBASIC22.11■■□□□ 1.13
MSH5O43196 RPS3AP44-201ENST00000425466 790 ntBASIC22.11■■□□□ 1.13
MSH5O43196 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
MSH5O43196 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC22.11■■□□□ 1.13
MSH5O43196 SGO1-210ENST00000443724 931 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
MSH5O43196 UBE2D3-211ENST00000502404 574 ntTSL 4 BASIC22.11■■□□□ 1.13
MSH5O43196 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC22.11■■□□□ 1.13
MSH5O43196 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC22.11■■□□□ 1.13
MSH5O43196 AC021106.1-201ENST00000509020 1058 ntBASIC22.11■■□□□ 1.13
MSH5O43196 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC22.11■■□□□ 1.13
MSH5O43196 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC22.11■■□□□ 1.13
MSH5O43196 AC104640.1-201ENST00000562617 2109 ntBASIC22.11■■□□□ 1.13
MSH5O43196 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC22.11■■□□□ 1.13
MSH5O43196 LINC02560-201ENST00000596379 459 ntBASIC22.11■■□□□ 1.13
MSH5O43196 AC026124.2-201ENST00000621847 656 ntBASIC22.11■■□□□ 1.13
MSH5O43196 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
MSH5O43196 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
MSH5O43196 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
MSH5O43196 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MSH5O43196 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
MSH5O43196 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
MSH5O43196 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC22.11■■□□□ 1.13
MSH5O43196 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MSH5O43196 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MSH5O43196 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
MSH5O43196 AC133963.1-201ENST00000504166 1679 ntBASIC22.11■■□□□ 1.13
MSH5O43196 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC22.1■■□□□ 1.13
MSH5O43196 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
MSH5O43196 PC-208ENST00000529047 1607 ntTSL 3 BASIC22.1■■□□□ 1.13
MSH5O43196 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MSH5O43196 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MSH5O43196 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
MSH5O43196 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MSH5O43196 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MSH5O43196 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MSH5O43196 CENPS-201ENST00000309048 896 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MSH5O43196 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC22.1■■□□□ 1.13
MSH5O43196 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
MSH5O43196 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
MSH5O43196 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC22.1■■□□□ 1.13
MSH5O43196 KRT18P32-201ENST00000424695 1287 ntBASIC22.1■■□□□ 1.13
MSH5O43196 UBE2V1P1-201ENST00000430836 445 ntBASIC22.1■■□□□ 1.13
MSH5O43196 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC22.1■■□□□ 1.13
MSH5O43196 FAM185BP-201ENST00000443595 716 ntBASIC22.1■■□□□ 1.13
MSH5O43196 COL6A4P2-205ENST00000509855 506 ntBASIC22.1■■□□□ 1.13
MSH5O43196 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC22.1■■□□□ 1.13
MSH5O43196 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC22.1■■□□□ 1.13
MSH5O43196 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC22.1■■□□□ 1.13
MSH5O43196 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC22.1■■□□□ 1.13
MSH5O43196 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MSH5O43196 AC121320.1-201ENST00000580975 839 ntTSL 3 BASIC22.1■■□□□ 1.13
MSH5O43196 AC005154.1-216ENST00000582145 1101 ntTSL 5 BASIC22.1■■□□□ 1.13
MSH5O43196 STK25P1-201ENST00000585406 838 ntBASIC22.1■■□□□ 1.13
MSH5O43196 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC22.1■■□□□ 1.13
MSH5O43196 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
MSH5O43196 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MSH5O43196 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
MSH5O43196 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC22.1■■□□□ 1.13
MSH5O43196 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms