Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 FAM197Y8-203ENST00000450145 560 ntBASIC10.84□□□□□ -0.67
NDUFA1O15239 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC10.84□□□□□ -0.67
NDUFA1O15239 AC108073.2-201ENST00000464002 357 ntBASIC10.84□□□□□ -0.67
NDUFA1O15239 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC10.84□□□□□ -0.67
NDUFA1O15239 MMP17-203ENST00000535004 719 ntTSL 3 BASIC10.84□□□□□ -0.67
NDUFA1O15239 CD63-210ENST00000550776 870 ntTSL 5 BASIC10.84□□□□□ -0.67
NDUFA1O15239 MIR4751-201ENST00000578027 74 ntBASIC10.84□□□□□ -0.67
NDUFA1O15239 MIR3909-201ENST00000579518 119 ntBASIC10.84□□□□□ -0.67
NDUFA1O15239 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC10.84□□□□□ -0.67
NDUFA1O15239 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC10.84□□□□□ -0.67
NDUFA1O15239 TBCB-205ENST00000585746 875 ntTSL 3 BASIC10.84□□□□□ -0.67
NDUFA1O15239 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC10.84□□□□□ -0.67
NDUFA1O15239 CLEC4GP1-201ENST00000596555 870 ntBASIC10.84□□□□□ -0.67
NDUFA1O15239 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC10.84□□□□□ -0.67
NDUFA1O15239 AL031055.1-201ENST00000606362 631 ntBASIC10.84□□□□□ -0.67
NDUFA1O15239 AL645728.2-201ENST00000641974 660 ntBASIC10.84□□□□□ -0.67
NDUFA1O15239 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
NDUFA1O15239 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC10.84□□□□□ -0.67
NDUFA1O15239 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC10.84□□□□□ -0.67
NDUFA1O15239 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
NDUFA1O15239 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC10.84□□□□□ -0.67
NDUFA1O15239 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
NDUFA1O15239 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC10.84□□□□□ -0.67
NDUFA1O15239 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC10.84□□□□□ -0.67
NDUFA1O15239 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC10.84□□□□□ -0.67
NDUFA1O15239 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC10.84□□□□□ -0.67
NDUFA1O15239 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFA1O15239 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
NDUFA1O15239 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
NDUFA1O15239 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC10.83□□□□□ -0.68
NDUFA1O15239 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC10.83□□□□□ -0.68
NDUFA1O15239 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC10.83□□□□□ -0.68
NDUFA1O15239 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 AC126335.2-201ENST00000623362 4637 ntBASIC10.83□□□□□ -0.68
NDUFA1O15239 AP001282.1-201ENST00000531301 1499 ntBASIC10.83□□□□□ -0.68
NDUFA1O15239 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC10.83□□□□□ -0.68
NDUFA1O15239 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
NDUFA1O15239 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
NDUFA1O15239 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 PMS2P4-201ENST00000412466 1052 ntBASIC10.83□□□□□ -0.68
NDUFA1O15239 KRT18P67-201ENST00000432816 1264 ntBASIC10.83□□□□□ -0.68
NDUFA1O15239 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
NDUFA1O15239 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC10.83□□□□□ -0.68
NDUFA1O15239 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC10.83□□□□□ -0.68
NDUFA1O15239 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC10.83□□□□□ -0.68
NDUFA1O15239 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC10.83□□□□□ -0.68
NDUFA1O15239 AL031432.2-201ENST00000566714 459 ntBASIC10.83□□□□□ -0.68
NDUFA1O15239 AL928711.1-201ENST00000570165 459 ntBASIC10.83□□□□□ -0.68
NDUFA1O15239 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 CYB561-216ENST00000582297 897 ntTSL 3 BASIC10.83□□□□□ -0.68
NDUFA1O15239 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
NDUFA1O15239 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC10.83□□□□□ -0.68
NDUFA1O15239 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC10.83□□□□□ -0.68
NDUFA1O15239 AC004790.2-201ENST00000623588 572 ntBASIC10.83□□□□□ -0.68
NDUFA1O15239 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC10.83□□□□□ -0.68
NDUFA1O15239 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC10.83□□□□□ -0.68
NDUFA1O15239 AJ011931.1-201ENST00000618749 2492 ntBASIC10.83□□□□□ -0.68
NDUFA1O15239 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC10.83□□□□□ -0.68
NDUFA1O15239 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC10.83□□□□□ -0.68
NDUFA1O15239 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC10.83□□□□□ -0.68
NDUFA1O15239 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC10.83□□□□□ -0.68
NDUFA1O15239 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
NDUFA1O15239 ILF3-AS1-201ENST00000591501 1983 ntBASIC10.83□□□□□ -0.68
NDUFA1O15239 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC10.83□□□□□ -0.68
NDUFA1O15239 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms