Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.21■□□□□ 0.03
SNPHO15079 ZNF92P1Y-201ENST00000415010 1191 ntBASIC15.21■□□□□ 0.03
SNPHO15079 AC092474.2-201ENST00000424288 719 ntBASIC15.21■□□□□ 0.03
SNPHO15079 ADH5P3-201ENST00000433842 1137 ntBASIC15.21■□□□□ 0.03
SNPHO15079 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SNPHO15079 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.21■□□□□ 0.03
SNPHO15079 AC123767.1-204ENST00000523523 273 ntTSL 3 BASIC15.21■□□□□ 0.03
SNPHO15079 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.21■□□□□ 0.03
SNPHO15079 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.21■□□□□ 0.03
SNPHO15079 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.21■□□□□ 0.03
SNPHO15079 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.21■□□□□ 0.03
SNPHO15079 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SNPHO15079 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SNPHO15079 AC021097.1-201ENST00000607902 574 ntBASIC15.21■□□□□ 0.03
SNPHO15079 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.21■□□□□ 0.03
SNPHO15079 AC084781.1-201ENST00000613737 656 ntBASIC15.21■□□□□ 0.03
SNPHO15079 AL035425.4-201ENST00000624509 1063 ntBASIC15.21■□□□□ 0.03
SNPHO15079 AL049536.1-201ENST00000625043 744 ntBASIC15.21■□□□□ 0.03
SNPHO15079 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SNPHO15079 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.21■□□□□ 0.03
SNPHO15079 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.21■□□□□ 0.03
SNPHO15079 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNPHO15079 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SNPHO15079 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.21■□□□□ 0.03
SNPHO15079 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SNPHO15079 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.21■□□□□ 0.02
SNPHO15079 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SNPHO15079 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SNPHO15079 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
SNPHO15079 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SNPHO15079 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SNPHO15079 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SNPHO15079 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SNPHO15079 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SNPHO15079 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SNPHO15079 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
SNPHO15079 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SNPHO15079 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.2■□□□□ 0.02
SNPHO15079 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.2■□□□□ 0.02
SNPHO15079 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.2■□□□□ 0.02
SNPHO15079 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.2■□□□□ 0.02
SNPHO15079 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SNPHO15079 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SNPHO15079 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC15.2■□□□□ 0.02
SNPHO15079 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC15.2■□□□□ 0.02
SNPHO15079 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.2■□□□□ 0.02
SNPHO15079 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.2■□□□□ 0.02
SNPHO15079 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.2■□□□□ 0.02
SNPHO15079 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SNPHO15079 AC021546.1-201ENST00000518927 1031 ntTSL 3 BASIC15.2■□□□□ 0.02
SNPHO15079 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.2■□□□□ 0.02
SNPHO15079 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SNPHO15079 FAM86C2P-203ENST00000528684 1004 ntBASIC15.2■□□□□ 0.02
SNPHO15079 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.2■□□□□ 0.02
SNPHO15079 RARRES2P8-201ENST00000566335 367 ntBASIC15.2■□□□□ 0.02
SNPHO15079 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
SNPHO15079 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 AC079781.4-201ENST00000641908 219 ntBASIC15.2■□□□□ 0.02
SNPHO15079 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.2■□□□□ 0.02
SNPHO15079 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.2■□□□□ 0.02
SNPHO15079 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.2■□□□□ 0.02
SNPHO15079 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.2■□□□□ 0.02
SNPHO15079 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
SNPHO15079 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SNPHO15079 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SNPHO15079 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SNPHO15079 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.2■□□□□ 0.02
SNPHO15079 CICP4-201ENST00000447359 2812 ntBASIC15.2■□□□□ 0.02
SNPHO15079 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.2■□□□□ 0.02
SNPHO15079 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SNPHO15079 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SNPHO15079 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SNPHO15079 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms