Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
CHD1O14646 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHD1O14646 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC24.62■■□□□ 1.53
CHD1O14646 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC24.62■■□□□ 1.53
CHD1O14646 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC24.62■■□□□ 1.53
CHD1O14646 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
CHD1O14646 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHD1O14646 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC24.62■■□□□ 1.53
CHD1O14646 RNA5SP359-201ENST00000364838 113 ntBASIC24.62■■□□□ 1.53
CHD1O14646 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC24.62■■□□□ 1.53
CHD1O14646 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CHD1O14646 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC24.62■■□□□ 1.53
CHD1O14646 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC24.62■■□□□ 1.53
CHD1O14646 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHD1O14646 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHD1O14646 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
CHD1O14646 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHD1O14646 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
CHD1O14646 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHD1O14646 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHD1O14646 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC24.62■■□□□ 1.53
CHD1O14646 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHD1O14646 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CHD1O14646 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHD1O14646 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CHD1O14646 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHD1O14646 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHD1O14646 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC24.61■■□□□ 1.53
CHD1O14646 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CHD1O14646 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC24.61■■□□□ 1.53
CHD1O14646 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC24.61■■□□□ 1.53
CHD1O14646 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHD1O14646 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC24.61■■□□□ 1.53
CHD1O14646 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC24.61■■□□□ 1.53
CHD1O14646 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
CHD1O14646 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHD1O14646 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHD1O14646 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHD1O14646 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CHD1O14646 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHD1O14646 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHD1O14646 MIR648-201ENST00000385046 94 ntBASIC24.61■■□□□ 1.53
CHD1O14646 AC244197.1-201ENST00000456494 951 ntBASIC24.61■■□□□ 1.53
CHD1O14646 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC24.61■■□□□ 1.53
CHD1O14646 CR383656.3-201ENST00000551315 183 ntBASIC24.61■■□□□ 1.53
CHD1O14646 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHD1O14646 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC24.61■■□□□ 1.53
CHD1O14646 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHD1O14646 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CHD1O14646 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC24.6■■□□□ 1.53
CHD1O14646 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHD1O14646 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CHD1O14646 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC24.6■■□□□ 1.53
CHD1O14646 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
CHD1O14646 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHD1O14646 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHD1O14646 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
CHD1O14646 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHD1O14646 MIR3180-2-201ENST00000581748 88 ntBASIC24.6■■□□□ 1.53
CHD1O14646 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC24.6■■□□□ 1.53
CHD1O14646 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHD1O14646 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
CHD1O14646 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHD1O14646 KRT18P9-201ENST00000604826 1300 ntBASIC24.59■■□□□ 1.53
CHD1O14646 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC24.59■■□□□ 1.53
CHD1O14646 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CHD1O14646 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CHD1O14646 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
CHD1O14646 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHD1O14646 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC24.59■■□□□ 1.53
CHD1O14646 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHD1O14646 AL357373.1-201ENST00000394974 322 ntBASIC24.59■■□□□ 1.53
CHD1O14646 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC24.59■■□□□ 1.53
CHD1O14646 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC24.59■■□□□ 1.53
CHD1O14646 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHD1O14646 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC24.59■■□□□ 1.53
CHD1O14646 PGAM1P12-201ENST00000505622 748 ntBASIC24.59■■□□□ 1.53
CHD1O14646 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC24.59■■□□□ 1.53
CHD1O14646 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHD1O14646 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHD1O14646 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC24.59■■□□□ 1.53
CHD1O14646 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC24.59■■□□□ 1.53
CHD1O14646 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CHD1O14646 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHD1O14646 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CHD1O14646 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
CHD1O14646 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHD1O14646 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CHD1O14646 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHD1O14646 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHD1O14646 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CHD1O14646 AC136759.1-202ENST00000530858 2194 ntBASIC24.58■■□□□ 1.53
CHD1O14646 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHD1O14646 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC24.58■■□□□ 1.53
CHD1O14646 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC24.58■■□□□ 1.53
CHD1O14646 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
CHD1O14646 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC24.58■■□□□ 1.53
CHD1O14646 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC24.58■■□□□ 1.53
CHD1O14646 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CHD1O14646 AL807761.2-201ENST00000422849 729 ntBASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms