Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
COLCA2A8K830 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
COLCA2A8K830 AC004899.2-201ENST00000622993 3860 ntBASIC12.06□□□□□ -0.48
COLCA2A8K830 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.06□□□□□ -0.48
COLCA2A8K830 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
COLCA2A8K830 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
COLCA2A8K830 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
COLCA2A8K830 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.05□□□□□ -0.48
COLCA2A8K830 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC12.05□□□□□ -0.48
COLCA2A8K830 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.05□□□□□ -0.48
COLCA2A8K830 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.05□□□□□ -0.48
COLCA2A8K830 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.05□□□□□ -0.48
COLCA2A8K830 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
COLCA2A8K830 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.05□□□□□ -0.48
COLCA2A8K830 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.05□□□□□ -0.48
COLCA2A8K830 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
COLCA2A8K830 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 ESRRAP1-201ENST00000400596 1257 ntBASIC12.05□□□□□ -0.48
COLCA2A8K830 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC12.05□□□□□ -0.48
COLCA2A8K830 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
COLCA2A8K830 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
COLCA2A8K830 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC12.05□□□□□ -0.48
COLCA2A8K830 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC12.05□□□□□ -0.48
COLCA2A8K830 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC12.05□□□□□ -0.48
COLCA2A8K830 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.05□□□□□ -0.48
COLCA2A8K830 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 AOC4P-203ENST00000566825 2289 ntBASIC12.05□□□□□ -0.48
COLCA2A8K830 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
COLCA2A8K830 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.05□□□□□ -0.48
COLCA2A8K830 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.05□□□□□ -0.48
COLCA2A8K830 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
COLCA2A8K830 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.05□□□□□ -0.48
COLCA2A8K830 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.05□□□□□ -0.48
COLCA2A8K830 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COLCA2A8K830 AC243591.1-201ENST00000452967 1364 ntBASIC12.05□□□□□ -0.48
COLCA2A8K830 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.04□□□□□ -0.48
COLCA2A8K830 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
COLCA2A8K830 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
COLCA2A8K830 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.04□□□□□ -0.48
COLCA2A8K830 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.04□□□□□ -0.48
COLCA2A8K830 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
COLCA2A8K830 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
COLCA2A8K830 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COLCA2A8K830 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COLCA2A8K830 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC12.04□□□□□ -0.48
COLCA2A8K830 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COLCA2A8K830 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COLCA2A8K830 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
COLCA2A8K830 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
COLCA2A8K830 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
COLCA2A8K830 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.04□□□□□ -0.48
COLCA2A8K830 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COLCA2A8K830 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
COLCA2A8K830 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
COLCA2A8K830 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC12.04□□□□□ -0.48
COLCA2A8K830 AC239809.2-201ENST00000415381 517 ntBASIC12.04□□□□□ -0.48
COLCA2A8K830 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
COLCA2A8K830 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC12.04□□□□□ -0.48
COLCA2A8K830 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC12.04□□□□□ -0.48
COLCA2A8K830 NUS1P1-201ENST00000446295 882 ntBASIC12.04□□□□□ -0.48
COLCA2A8K830 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
COLCA2A8K830 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
COLCA2A8K830 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC12.04□□□□□ -0.48
COLCA2A8K830 AC097488.1-201ENST00000507834 756 ntBASIC12.04□□□□□ -0.48
COLCA2A8K830 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
COLCA2A8K830 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC12.04□□□□□ -0.48
COLCA2A8K830 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
COLCA2A8K830 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
COLCA2A8K830 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC12.04□□□□□ -0.48
COLCA2A8K830 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
COLCA2A8K830 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
COLCA2A8K830 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
COLCA2A8K830 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
COLCA2A8K830 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COLCA2A8K830 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.04□□□□□ -0.48
COLCA2A8K830 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.04□□□□□ -0.48
COLCA2A8K830 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.04□□□□□ -0.48
COLCA2A8K830 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.04□□□□□ -0.48
COLCA2A8K830 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms