Protein–RNA interactions for Protein: A6NNM3

RIMBP3B, RIMS-binding protein 3B, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3BA6NNM3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
RIMBP3BA6NNM3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
RIMBP3BA6NNM3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC24.06■■□□□ 1.44
RIMBP3BA6NNM3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RIMBP3BA6NNM3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RIMBP3BA6NNM3 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC24.06■■□□□ 1.44
RIMBP3BA6NNM3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC24.06■■□□□ 1.44
RIMBP3BA6NNM3 RAN-210ENST00000541630 1475 ntTSL 2 BASIC24.06■■□□□ 1.44
RIMBP3BA6NNM3 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
RIMBP3BA6NNM3 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
RIMBP3BA6NNM3 ACTG1P19-201ENST00000418987 1116 ntBASIC24.06■■□□□ 1.44
RIMBP3BA6NNM3 RHOQP2-201ENST00000449922 579 ntBASIC24.06■■□□□ 1.44
RIMBP3BA6NNM3 AC093826.1-201ENST00000508655 993 ntBASIC24.06■■□□□ 1.44
RIMBP3BA6NNM3 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC24.06■■□□□ 1.44
RIMBP3BA6NNM3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC24.06■■□□□ 1.44
RIMBP3BA6NNM3 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC24.06■■□□□ 1.44
RIMBP3BA6NNM3 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
RIMBP3BA6NNM3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
RIMBP3BA6NNM3 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
RIMBP3BA6NNM3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RIMBP3BA6NNM3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC24.05■■□□□ 1.44
RIMBP3BA6NNM3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RIMBP3BA6NNM3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RIMBP3BA6NNM3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RIMBP3BA6NNM3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RIMBP3BA6NNM3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RIMBP3BA6NNM3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC24.05■■□□□ 1.44
RIMBP3BA6NNM3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC24.05■■□□□ 1.44
RIMBP3BA6NNM3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RIMBP3BA6NNM3 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RIMBP3BA6NNM3 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RIMBP3BA6NNM3 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RIMBP3BA6NNM3 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RIMBP3BA6NNM3 RPL35P9-201ENST00000446059 350 ntBASIC24.05■■□□□ 1.44
RIMBP3BA6NNM3 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC24.05■■□□□ 1.44
RIMBP3BA6NNM3 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC24.05■■□□□ 1.44
RIMBP3BA6NNM3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC24.05■■□□□ 1.44
RIMBP3BA6NNM3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC24.05■■□□□ 1.44
RIMBP3BA6NNM3 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC24.05■■□□□ 1.44
RIMBP3BA6NNM3 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 AC098818.2-201ENST00000564925 2320 ntBASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 OR51A9P-201ENST00000422578 911 ntBASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 AC138701.2-201ENST00000553634 226 ntBASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 BICD1-207ENST00000551848 1962 ntBASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
RIMBP3BA6NNM3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC24.03■■□□□ 1.44
RIMBP3BA6NNM3 KRT18P36-201ENST00000411618 1276 ntBASIC24.03■■□□□ 1.44
RIMBP3BA6NNM3 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RIMBP3BA6NNM3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
RIMBP3BA6NNM3 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RIMBP3BA6NNM3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC24.03■■□□□ 1.44
RIMBP3BA6NNM3 FBXO36P1-201ENST00000579006 471 ntBASIC24.03■■□□□ 1.44
RIMBP3BA6NNM3 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RIMBP3BA6NNM3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RIMBP3BA6NNM3 INE2-201ENST00000630399 1874 ntBASIC24.03■■□□□ 1.44
RIMBP3BA6NNM3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC24.03■■□□□ 1.44
RIMBP3BA6NNM3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RIMBP3BA6NNM3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RIMBP3BA6NNM3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC24.03■■□□□ 1.44
RIMBP3BA6NNM3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC24.03■■□□□ 1.44
RIMBP3BA6NNM3 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3BA6NNM3 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3BA6NNM3 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3BA6NNM3 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC24.02■■□□□ 1.44
RIMBP3BA6NNM3 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC24.02■■□□□ 1.44
RIMBP3BA6NNM3 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC24.02■■□□□ 1.44
RIMBP3BA6NNM3 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC24.02■■□□□ 1.44
RIMBP3BA6NNM3 AC138696.2-201ENST00000607376 223 ntBASIC24.02■■□□□ 1.44
RIMBP3BA6NNM3 AC009145.4-201ENST00000625119 1294 ntBASIC24.02■■□□□ 1.44
RIMBP3BA6NNM3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3BA6NNM3 AC025183.3-201ENST00000623526 1482 ntBASIC24.02■■□□□ 1.44
RIMBP3BA6NNM3 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3BA6NNM3 CYP4F23P-201ENST00000593402 1579 ntBASIC24.02■■□□□ 1.44
RIMBP3BA6NNM3 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3BA6NNM3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3BA6NNM3 AC009113.1-201ENST00000570267 2443 ntBASIC24.02■■□□□ 1.44
RIMBP3BA6NNM3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC24.02■■□□□ 1.44
RIMBP3BA6NNM3 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3BA6NNM3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3BA6NNM3 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
RIMBP3BA6NNM3 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3BA6NNM3 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms