Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SRRM3A6NNA2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.39■□□□□ 0.21
SRRM3A6NNA2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 KRT18P32-201ENST00000424695 1287 ntBASIC16.39■□□□□ 0.21
SRRM3A6NNA2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 HILS1-202ENST00000545329 423 ntBASIC16.39■□□□□ 0.21
SRRM3A6NNA2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.39■□□□□ 0.21
SRRM3A6NNA2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 FGD5P1-202ENST00000614866 2498 ntBASIC16.38■□□□□ 0.21
SRRM3A6NNA2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 AL592309.1-201ENST00000443127 649 ntBASIC16.38■□□□□ 0.21
SRRM3A6NNA2 KRT8P48-201ENST00000515599 1220 ntBASIC16.38■□□□□ 0.21
SRRM3A6NNA2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SRRM3A6NNA2 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms