Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 REXO1L1P-202ENST00000608646 1974 ntBASIC16.04■□□□□ 0.16
CAPN8A6NHC0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 FO393414.2-201ENST00000405153 598 ntBASIC16.04■□□□□ 0.16
CAPN8A6NHC0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 AC241585.1-201ENST00000433527 519 ntBASIC16.04■□□□□ 0.16
CAPN8A6NHC0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.04■□□□□ 0.16
CAPN8A6NHC0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CAPN8A6NHC0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 AC022532.1-201ENST00000624563 1728 ntBASIC16.03■□□□□ 0.16
CAPN8A6NHC0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.03■□□□□ 0.16
CAPN8A6NHC0 AZGP1P1-201ENST00000411909 902 ntBASIC16.03■□□□□ 0.16
CAPN8A6NHC0 NME2P1-201ENST00000426182 414 ntBASIC16.03■□□□□ 0.16
CAPN8A6NHC0 HIST3H2BA-201ENST00000436555 524 ntBASIC16.03■□□□□ 0.16
CAPN8A6NHC0 CRB3P1-201ENST00000449338 276 ntBASIC16.03■□□□□ 0.16
CAPN8A6NHC0 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.03■□□□□ 0.16
CAPN8A6NHC0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 AL590560.3-201ENST00000623350 461 ntBASIC16.03■□□□□ 0.16
CAPN8A6NHC0 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPN8A6NHC0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 AC087499.5-201ENST00000452760 1342 ntBASIC16.02■□□□□ 0.16
CAPN8A6NHC0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 TSSK5P-201ENST00000423978 907 ntBASIC16.02■□□□□ 0.16
CAPN8A6NHC0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms