Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 AC005912.2-201ENST00000619492 2400 ntBASIC13.52□□□□□ -0.25
TMEM235A6NFC5 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 C8orf49-201ENST00000525043 1968 ntBASIC13.51□□□□□ -0.25
TMEM235A6NFC5 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 HNRNPDP1-201ENST00000439535 754 ntBASIC13.51□□□□□ -0.25
TMEM235A6NFC5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 PRYP6-201ENST00000514804 343 ntBASIC13.51□□□□□ -0.25
TMEM235A6NFC5 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 AC243562.2-201ENST00000561247 970 ntBASIC13.51□□□□□ -0.25
TMEM235A6NFC5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 AJ011931.1-201ENST00000618749 2492 ntBASIC13.51□□□□□ -0.25
TMEM235A6NFC5 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM235A6NFC5 REXO1L1P-202ENST00000608646 1974 ntBASIC13.51□□□□□ -0.25
TMEM235A6NFC5 AC117489.1-201ENST00000625169 3217 ntBASIC13.51□□□□□ -0.25
TMEM235A6NFC5 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 BNIP3P1-202ENST00000550043 1585 ntBASIC13.5□□□□□ -0.25
TMEM235A6NFC5 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.5□□□□□ -0.25
TMEM235A6NFC5 AC092474.2-201ENST00000424288 719 ntBASIC13.5□□□□□ -0.25
TMEM235A6NFC5 AC108751.1-201ENST00000490852 363 ntBASIC13.5□□□□□ -0.25
TMEM235A6NFC5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms