Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 AL365330.1-201ENST00000607459 531 ntBASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RNF103-CHMP3A0A140T963 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 IL9RP2-201ENST00000423948 1312 ntBASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 PMS2P7-201ENST00000506558 1336 ntBASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 PRYP6-201ENST00000514804 343 ntBASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RNF103-CHMP3A0A140T963 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF103-CHMP3A0A140T963 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
RNF103-CHMP3A0A140T963 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF103-CHMP3A0A140T963 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RNF103-CHMP3A0A140T963 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
RNF103-CHMP3A0A140T963 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF103-CHMP3A0A140T963 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.27■□□□□ 0.03
RNF103-CHMP3A0A140T963 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF103-CHMP3A0A140T963 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.27■□□□□ 0.03
RNF103-CHMP3A0A140T963 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
RNF103-CHMP3A0A140T963 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF103-CHMP3A0A140T963 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF103-CHMP3A0A140T963 AC005089.1-201ENST00000619486 2241 ntBASIC15.27■□□□□ 0.03
RNF103-CHMP3A0A140T963 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF103-CHMP3A0A140T963 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF103-CHMP3A0A140T963 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 AC245100.5-201ENST00000452108 331 ntBASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 PDPK2P-202ENST00000562415 1191 ntBASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 AL161645.1-201ENST00000622716 1255 ntBASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF103-CHMP3A0A140T963 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms