Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.42■□□□□ 0.7
CDC42EP3Q9UKI2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.42■□□□□ 0.7
CDC42EP3Q9UKI2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CDC42EP3Q9UKI2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42EP3Q9UKI2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42EP3Q9UKI2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42EP3Q9UKI2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.41■□□□□ 0.7
CDC42EP3Q9UKI2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42EP3Q9UKI2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42EP3Q9UKI2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.41■□□□□ 0.7
CDC42EP3Q9UKI2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42EP3Q9UKI2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.4■□□□□ 0.7
CDC42EP3Q9UKI2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42EP3Q9UKI2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42EP3Q9UKI2 AC142381.2-201ENST00000566120 298 ntBASIC19.4■□□□□ 0.7
CDC42EP3Q9UKI2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CDC42EP3Q9UKI2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CDC42EP3Q9UKI2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.4■□□□□ 0.7
CDC42EP3Q9UKI2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDC42EP3Q9UKI2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC42EP3Q9UKI2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC42EP3Q9UKI2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC42EP3Q9UKI2 AC106739.1-201ENST00000617035 715 ntBASIC19.39■□□□□ 0.69
CDC42EP3Q9UKI2 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.39■□□□□ 0.69
CDC42EP3Q9UKI2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CDC42EP3Q9UKI2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC42EP3Q9UKI2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC42EP3Q9UKI2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDC42EP3Q9UKI2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDC42EP3Q9UKI2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDC42EP3Q9UKI2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CDC42EP3Q9UKI2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CDC42EP3Q9UKI2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDC42EP3Q9UKI2 AL512631.2-201ENST00000604634 923 ntBASIC19.38■□□□□ 0.69
CDC42EP3Q9UKI2 AC091060.1-201ENST00000623524 1766 ntBASIC19.38■□□□□ 0.69
CDC42EP3Q9UKI2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CDC42EP3Q9UKI2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42EP3Q9UKI2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.37■□□□□ 0.69
CDC42EP3Q9UKI2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42EP3Q9UKI2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42EP3Q9UKI2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42EP3Q9UKI2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42EP3Q9UKI2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42EP3Q9UKI2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42EP3Q9UKI2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.37■□□□□ 0.69
CDC42EP3Q9UKI2 PBX2P1-201ENST00000493219 1291 ntBASIC19.37■□□□□ 0.69
CDC42EP3Q9UKI2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42EP3Q9UKI2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42EP3Q9UKI2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42EP3Q9UKI2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42EP3Q9UKI2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42EP3Q9UKI2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42EP3Q9UKI2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDC42EP3Q9UKI2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.36■□□□□ 0.69
CDC42EP3Q9UKI2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CDC42EP3Q9UKI2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDC42EP3Q9UKI2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDC42EP3Q9UKI2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42EP3Q9UKI2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42EP3Q9UKI2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42EP3Q9UKI2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42EP3Q9UKI2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42EP3Q9UKI2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42EP3Q9UKI2 ZNRF2P3-201ENST00000424200 374 ntBASIC19.35■□□□□ 0.69
CDC42EP3Q9UKI2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.35■□□□□ 0.69
CDC42EP3Q9UKI2 AC104564.3-201ENST00000582367 638 ntBASIC19.35■□□□□ 0.69
CDC42EP3Q9UKI2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.35■□□□□ 0.69
CDC42EP3Q9UKI2 MIR5787-201ENST00000611784 55 ntBASIC19.35■□□□□ 0.69
CDC42EP3Q9UKI2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42EP3Q9UKI2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.35■□□□□ 0.69
CDC42EP3Q9UKI2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.34■□□□□ 0.69
CDC42EP3Q9UKI2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42EP3Q9UKI2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42EP3Q9UKI2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.34■□□□□ 0.69
CDC42EP3Q9UKI2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42EP3Q9UKI2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42EP3Q9UKI2 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.34■□□□□ 0.69
CDC42EP3Q9UKI2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.34■□□□□ 0.69
CDC42EP3Q9UKI2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.34■□□□□ 0.69
CDC42EP3Q9UKI2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDC42EP3Q9UKI2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDC42EP3Q9UKI2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDC42EP3Q9UKI2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDC42EP3Q9UKI2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.33■□□□□ 0.69
CDC42EP3Q9UKI2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CDC42EP3Q9UKI2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDC42EP3Q9UKI2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDC42EP3Q9UKI2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.33■□□□□ 0.68
CDC42EP3Q9UKI2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CDC42EP3Q9UKI2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.33■□□□□ 0.68
CDC42EP3Q9UKI2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.33■□□□□ 0.68
CDC42EP3Q9UKI2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.33■□□□□ 0.68
CDC42EP3Q9UKI2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
CDC42EP3Q9UKI2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.32■□□□□ 0.68
CDC42EP3Q9UKI2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42EP3Q9UKI2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42EP3Q9UKI2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDC42EP3Q9UKI2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42EP3Q9UKI2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CDC42EP3Q9UKI2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms