Protein–RNA interactions for Protein: Q96N35

LINC00052, Putative uncharacterized protein encoded by LINC00052, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00052Q96N35 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LINC00052Q96N35 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LINC00052Q96N35 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00052Q96N35 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.13■□□□□ 0.65
LINC00052Q96N35 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.13■□□□□ 0.65
LINC00052Q96N35 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LINC00052Q96N35 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00052Q96N35 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00052Q96N35 LINC00526-201ENST00000581067 1875 ntBASIC19.12■□□□□ 0.65
LINC00052Q96N35 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC00052Q96N35 AP003733.4-201ENST00000623785 1697 ntBASIC19.12■□□□□ 0.65
LINC00052Q96N35 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LINC00052Q96N35 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LINC00052Q96N35 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC00052Q96N35 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC00052Q96N35 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LINC00052Q96N35 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC00052Q96N35 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
LINC00052Q96N35 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.11■□□□□ 0.65
LINC00052Q96N35 DUSP8P3-201ENST00000399571 1760 ntBASIC19.11■□□□□ 0.65
LINC00052Q96N35 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00052Q96N35 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LINC00052Q96N35 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.11■□□□□ 0.65
LINC00052Q96N35 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00052Q96N35 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00052Q96N35 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00052Q96N35 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LINC00052Q96N35 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LINC00052Q96N35 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00052Q96N35 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00052Q96N35 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00052Q96N35 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00052Q96N35 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00052Q96N35 AC092667.1-201ENST00000434301 2586 ntBASIC19.1■□□□□ 0.65
LINC00052Q96N35 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00052Q96N35 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00052Q96N35 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00052Q96N35 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00052Q96N35 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00052Q96N35 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
LINC00052Q96N35 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.1■□□□□ 0.65
LINC00052Q96N35 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00052Q96N35 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00052Q96N35 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00052Q96N35 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00052Q96N35 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
LINC00052Q96N35 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.1■□□□□ 0.65
LINC00052Q96N35 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00052Q96N35 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00052Q96N35 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00052Q96N35 RPS2P35-201ENST00000443417 897 ntBASIC19.09■□□□□ 0.65
LINC00052Q96N35 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.09■□□□□ 0.65
LINC00052Q96N35 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
LINC00052Q96N35 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00052Q96N35 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00052Q96N35 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LINC00052Q96N35 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.09■□□□□ 0.65
LINC00052Q96N35 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.09■□□□□ 0.65
LINC00052Q96N35 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
LINC00052Q96N35 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.09■□□□□ 0.65
LINC00052Q96N35 AC127496.7-201ENST00000625110 1798 ntBASIC19.09■□□□□ 0.65
LINC00052Q96N35 AC142472.1-201ENST00000612013 1741 ntBASIC19.08■□□□□ 0.65
LINC00052Q96N35 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LINC00052Q96N35 FOXO3B-201ENST00000395675 1928 ntBASIC19.08■□□□□ 0.65
LINC00052Q96N35 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.08■□□□□ 0.64
LINC00052Q96N35 DUX4L29-201ENST00000425409 679 ntBASIC19.08■□□□□ 0.64
LINC00052Q96N35 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LINC00052Q96N35 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
LINC00052Q96N35 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LINC00052Q96N35 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LINC00052Q96N35 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
LINC00052Q96N35 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LINC00052Q96N35 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00052Q96N35 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00052Q96N35 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00052Q96N35 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00052Q96N35 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00052Q96N35 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00052Q96N35 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC00052Q96N35 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.06■□□□□ 0.64
LINC00052Q96N35 AC073130.3-201ENST00000624389 2278 ntBASIC19.06■□□□□ 0.64
LINC00052Q96N35 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC00052Q96N35 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC00052Q96N35 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.06■□□□□ 0.64
LINC00052Q96N35 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC00052Q96N35 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
LINC00052Q96N35 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.05■□□□□ 0.64
LINC00052Q96N35 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.05■□□□□ 0.64
LINC00052Q96N35 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
LINC00052Q96N35 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00052Q96N35 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.05■□□□□ 0.64
LINC00052Q96N35 AC021231.2-201ENST00000594613 730 ntBASIC19.05■□□□□ 0.64
LINC00052Q96N35 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.05■□□□□ 0.64
LINC00052Q96N35 AC141586.4-201ENST00000624558 1573 ntBASIC19.05■□□□□ 0.64
LINC00052Q96N35 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00052Q96N35 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00052Q96N35 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.05■□□□□ 0.64
LINC00052Q96N35 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC00052Q96N35 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
LINC00052Q96N35 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms