Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RNF31Q96EP0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF31Q96EP0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF31Q96EP0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF31Q96EP0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RNF31Q96EP0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RNF31Q96EP0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RNF31Q96EP0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.41■■□□□ 1.18
RNF31Q96EP0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.41■■□□□ 1.18
RNF31Q96EP0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF31Q96EP0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.41■■□□□ 1.18
RNF31Q96EP0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
RNF31Q96EP0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.41■■□□□ 1.18
RNF31Q96EP0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
RNF31Q96EP0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RNF31Q96EP0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
RNF31Q96EP0 AC019069.1-201ENST00000610008 1333 ntBASIC22.4■■□□□ 1.18
RNF31Q96EP0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF31Q96EP0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF31Q96EP0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.4■■□□□ 1.18
RNF31Q96EP0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
RNF31Q96EP0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
RNF31Q96EP0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.39■■□□□ 1.18
RNF31Q96EP0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.39■■□□□ 1.17
RNF31Q96EP0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.39■■□□□ 1.17
RNF31Q96EP0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
RNF31Q96EP0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RNF31Q96EP0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.39■■□□□ 1.17
RNF31Q96EP0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RNF31Q96EP0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RNF31Q96EP0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RNF31Q96EP0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RNF31Q96EP0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.38■■□□□ 1.17
RNF31Q96EP0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
RNF31Q96EP0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
RNF31Q96EP0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RNF31Q96EP0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
RNF31Q96EP0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RNF31Q96EP0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
RNF31Q96EP0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RNF31Q96EP0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RNF31Q96EP0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.37■■□□□ 1.17
RNF31Q96EP0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.37■■□□□ 1.17
RNF31Q96EP0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF31Q96EP0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RNF31Q96EP0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF31Q96EP0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
RNF31Q96EP0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.36■■□□□ 1.17
RNF31Q96EP0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF31Q96EP0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.36■■□□□ 1.17
RNF31Q96EP0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RNF31Q96EP0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.36■■□□□ 1.17
RNF31Q96EP0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.36■■□□□ 1.17
RNF31Q96EP0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.36■■□□□ 1.17
RNF31Q96EP0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.36■■□□□ 1.17
RNF31Q96EP0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.35■■□□□ 1.17
RNF31Q96EP0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF31Q96EP0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
RNF31Q96EP0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF31Q96EP0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF31Q96EP0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
RNF31Q96EP0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF31Q96EP0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF31Q96EP0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RNF31Q96EP0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.34■■□□□ 1.17
RNF31Q96EP0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF31Q96EP0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.34■■□□□ 1.17
RNF31Q96EP0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.34■■□□□ 1.17
RNF31Q96EP0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.34■■□□□ 1.17
RNF31Q96EP0 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.34■■□□□ 1.17
RNF31Q96EP0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.34■■□□□ 1.17
RNF31Q96EP0 AC010997.5-201ENST00000609182 354 ntBASIC22.34■■□□□ 1.17
RNF31Q96EP0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF31Q96EP0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
RNF31Q96EP0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF31Q96EP0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RNF31Q96EP0 MTDHP2-201ENST00000601468 714 ntBASIC22.33■■□□□ 1.17
RNF31Q96EP0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
RNF31Q96EP0 AF131216.4-201ENST00000638924 1588 ntBASIC22.33■■□□□ 1.16
RNF31Q96EP0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.33■■□□□ 1.16
RNF31Q96EP0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
RNF31Q96EP0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF31Q96EP0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF31Q96EP0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF31Q96EP0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF31Q96EP0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF31Q96EP0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF31Q96EP0 AC131281.2-201ENST00000520478 145 ntBASIC22.32■■□□□ 1.16
RNF31Q96EP0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF31Q96EP0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF31Q96EP0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.32■■□□□ 1.16
RNF31Q96EP0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.32■■□□□ 1.16
RNF31Q96EP0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF31Q96EP0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF31Q96EP0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
RNF31Q96EP0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF31Q96EP0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF31Q96EP0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF31Q96EP0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF31Q96EP0 AC092803.2-201ENST00000564287 1899 ntBASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms