Protein–RNA interactions for Protein: Q969M7

UBE2F, NEDD8-conjugating enzyme UBE2F, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2FQ969M7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
UBE2FQ969M7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
UBE2FQ969M7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
UBE2FQ969M7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
UBE2FQ969M7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.27■■□□□ 1
UBE2FQ969M7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.27■■□□□ 1
UBE2FQ969M7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UBE2FQ969M7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.27■■□□□ 1
UBE2FQ969M7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UBE2FQ969M7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.26■□□□□ 0.99
UBE2FQ969M7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBE2FQ969M7 HLA-L-211ENST00000482052 1765 ntBASIC21.26■□□□□ 0.99
UBE2FQ969M7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
UBE2FQ969M7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
UBE2FQ969M7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBE2FQ969M7 ZNRF2P2-203ENST00000454624 420 ntBASIC21.26■□□□□ 0.99
UBE2FQ969M7 MIR6089-201ENST00000616698 64 ntBASIC21.26■□□□□ 0.99
UBE2FQ969M7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.26■□□□□ 0.99
UBE2FQ969M7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.26■□□□□ 0.99
UBE2FQ969M7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
UBE2FQ969M7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBE2FQ969M7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBE2FQ969M7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBE2FQ969M7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.25■□□□□ 0.99
UBE2FQ969M7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBE2FQ969M7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBE2FQ969M7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBE2FQ969M7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2FQ969M7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
UBE2FQ969M7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2FQ969M7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2FQ969M7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2FQ969M7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2FQ969M7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2FQ969M7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2FQ969M7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2FQ969M7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.23■□□□□ 0.99
UBE2FQ969M7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.23■□□□□ 0.99
UBE2FQ969M7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
UBE2FQ969M7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
UBE2FQ969M7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBE2FQ969M7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBE2FQ969M7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBE2FQ969M7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBE2FQ969M7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UBE2FQ969M7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBE2FQ969M7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBE2FQ969M7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.22■□□□□ 0.99
UBE2FQ969M7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UBE2FQ969M7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UBE2FQ969M7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UBE2FQ969M7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
UBE2FQ969M7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBE2FQ969M7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBE2FQ969M7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBE2FQ969M7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UBE2FQ969M7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBE2FQ969M7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
UBE2FQ969M7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
UBE2FQ969M7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
UBE2FQ969M7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBE2FQ969M7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
UBE2FQ969M7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBE2FQ969M7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.2■□□□□ 0.98
UBE2FQ969M7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBE2FQ969M7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.19■□□□□ 0.98
UBE2FQ969M7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UBE2FQ969M7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UBE2FQ969M7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
UBE2FQ969M7 EP400NL-214ENST00000641289 2402 ntBASIC21.19■□□□□ 0.98
UBE2FQ969M7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.19■□□□□ 0.98
UBE2FQ969M7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UBE2FQ969M7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBE2FQ969M7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBE2FQ969M7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UBE2FQ969M7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBE2FQ969M7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBE2FQ969M7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
UBE2FQ969M7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
UBE2FQ969M7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBE2FQ969M7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.18■□□□□ 0.98
UBE2FQ969M7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
UBE2FQ969M7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.18■□□□□ 0.98
UBE2FQ969M7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
UBE2FQ969M7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
UBE2FQ969M7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
UBE2FQ969M7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
UBE2FQ969M7 AL117328.2-201ENST00000624617 1940 ntBASIC21.17■□□□□ 0.98
UBE2FQ969M7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBE2FQ969M7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.17■□□□□ 0.98
UBE2FQ969M7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBE2FQ969M7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UBE2FQ969M7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
UBE2FQ969M7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBE2FQ969M7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBE2FQ969M7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBE2FQ969M7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBE2FQ969M7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBE2FQ969M7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.16■□□□□ 0.98
UBE2FQ969M7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms