Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.89■■■□□ 2.7
COL22A1Q8NFW1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.7
COL22A1Q8NFW1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC31.89■■■□□ 2.7
COL22A1Q8NFW1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC31.89■■■□□ 2.7
COL22A1Q8NFW1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
COL22A1Q8NFW1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
COL22A1Q8NFW1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC31.88■■■□□ 2.69
COL22A1Q8NFW1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
COL22A1Q8NFW1 PTCHD3P2-201ENST00000424937 1205 ntBASIC31.88■■■□□ 2.69
COL22A1Q8NFW1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC31.88■■■□□ 2.69
COL22A1Q8NFW1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC31.87■■■□□ 2.69
COL22A1Q8NFW1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
COL22A1Q8NFW1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC31.87■■■□□ 2.69
COL22A1Q8NFW1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC31.87■■■□□ 2.69
COL22A1Q8NFW1 AC011298.3-201ENST00000615796 283 ntBASIC31.87■■■□□ 2.69
COL22A1Q8NFW1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
COL22A1Q8NFW1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.87■■■□□ 2.69
COL22A1Q8NFW1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
COL22A1Q8NFW1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
COL22A1Q8NFW1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
COL22A1Q8NFW1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
COL22A1Q8NFW1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
COL22A1Q8NFW1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC31.86■■■□□ 2.69
COL22A1Q8NFW1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC31.86■■■□□ 2.69
COL22A1Q8NFW1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
COL22A1Q8NFW1 FOXO3B-201ENST00000395675 1928 ntBASIC31.86■■■□□ 2.69
COL22A1Q8NFW1 IRS3P-201ENST00000223076 1006 ntBASIC31.86■■■□□ 2.69
COL22A1Q8NFW1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC31.86■■■□□ 2.69
COL22A1Q8NFW1 SERBP1P1-201ENST00000396021 1160 ntBASIC31.86■■■□□ 2.69
COL22A1Q8NFW1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
COL22A1Q8NFW1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
COL22A1Q8NFW1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
COL22A1Q8NFW1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
COL22A1Q8NFW1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC31.85■■■□□ 2.69
COL22A1Q8NFW1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
COL22A1Q8NFW1 LBH-205ENST00000407930 756 ntTSL 2 BASIC31.85■■■□□ 2.69
COL22A1Q8NFW1 KRT18P5-201ENST00000436075 1291 ntBASIC31.85■■■□□ 2.69
COL22A1Q8NFW1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC31.85■■■□□ 2.69
COL22A1Q8NFW1 AC092437.1-201ENST00000624794 1048 ntBASIC31.85■■■□□ 2.69
COL22A1Q8NFW1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
COL22A1Q8NFW1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC31.84■■■□□ 2.69
COL22A1Q8NFW1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
COL22A1Q8NFW1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
COL22A1Q8NFW1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
COL22A1Q8NFW1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
COL22A1Q8NFW1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
COL22A1Q8NFW1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
COL22A1Q8NFW1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
COL22A1Q8NFW1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
COL22A1Q8NFW1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC31.82■■■□□ 2.68
COL22A1Q8NFW1 AC034268.1-201ENST00000441047 882 ntBASIC31.82■■■□□ 2.68
COL22A1Q8NFW1 SYT6-210ENST00000641643 1587 ntBASIC31.82■■■□□ 2.68
COL22A1Q8NFW1 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
COL22A1Q8NFW1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.81■■■□□ 2.68
COL22A1Q8NFW1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
COL22A1Q8NFW1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC31.81■■■□□ 2.68
COL22A1Q8NFW1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC31.81■■■□□ 2.68
COL22A1Q8NFW1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC31.81■■■□□ 2.68
COL22A1Q8NFW1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC31.8■■■□□ 2.68
COL22A1Q8NFW1 AC099791.1-201ENST00000416440 715 ntBASIC31.8■■■□□ 2.68
COL22A1Q8NFW1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC31.8■■■□□ 2.68
COL22A1Q8NFW1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC31.8■■■□□ 2.68
COL22A1Q8NFW1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC31.8■■■□□ 2.68
COL22A1Q8NFW1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC31.8■■■□□ 2.68
COL22A1Q8NFW1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
COL22A1Q8NFW1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
COL22A1Q8NFW1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
COL22A1Q8NFW1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC31.79■■■□□ 2.68
COL22A1Q8NFW1 AC090877.2-201ENST00000558441 1738 ntBASIC31.79■■■□□ 2.68
COL22A1Q8NFW1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
COL22A1Q8NFW1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
COL22A1Q8NFW1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC31.78■■■□□ 2.68
COL22A1Q8NFW1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC31.78■■■□□ 2.68
COL22A1Q8NFW1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC31.78■■■□□ 2.68
COL22A1Q8NFW1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
COL22A1Q8NFW1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
COL22A1Q8NFW1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC31.78■■■□□ 2.68
COL22A1Q8NFW1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
COL22A1Q8NFW1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC31.77■■■□□ 2.68
COL22A1Q8NFW1 SP2-202ENST00000613139 908 ntTSL 5 BASIC31.77■■■□□ 2.68
COL22A1Q8NFW1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
COL22A1Q8NFW1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
COL22A1Q8NFW1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
COL22A1Q8NFW1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC31.76■■■□□ 2.67
COL22A1Q8NFW1 AC092171.4-201ENST00000609130 632 ntBASIC31.76■■■□□ 2.67
COL22A1Q8NFW1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC31.75■■■□□ 2.67
COL22A1Q8NFW1 AL137784.2-201ENST00000607332 1000 ntBASIC31.75■■■□□ 2.67
COL22A1Q8NFW1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
COL22A1Q8NFW1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
COL22A1Q8NFW1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
COL22A1Q8NFW1 AL138724.1-201ENST00000606771 1088 ntBASIC31.75■■■□□ 2.67
COL22A1Q8NFW1 AL031602.1-201ENST00000633169 911 ntBASIC31.75■■■□□ 2.67
COL22A1Q8NFW1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
COL22A1Q8NFW1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC31.74■■■□□ 2.67
COL22A1Q8NFW1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC31.74■■■□□ 2.67
COL22A1Q8NFW1 AC022517.1-201ENST00000592429 346 ntBASIC31.74■■■□□ 2.67
COL22A1Q8NFW1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
COL22A1Q8NFW1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
COL22A1Q8NFW1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC31.73■■■□□ 2.67
COL22A1Q8NFW1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC31.73■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms