Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PHC3Q8NDX5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PHC3Q8NDX5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PHC3Q8NDX5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PHC3Q8NDX5 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PHC3Q8NDX5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PHC3Q8NDX5 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PHC3Q8NDX5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
PHC3Q8NDX5 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PHC3Q8NDX5 AC074183.2-201ENST00000623112 922 ntBASIC23.21■■□□□ 1.31
PHC3Q8NDX5 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PHC3Q8NDX5 AC097639.1-201ENST00000565519 1891 ntBASIC23.21■■□□□ 1.31
PHC3Q8NDX5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PHC3Q8NDX5 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PHC3Q8NDX5 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PHC3Q8NDX5 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PHC3Q8NDX5 LONRF2P2-201ENST00000439212 571 ntBASIC23.2■■□□□ 1.3
PHC3Q8NDX5 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.2■■□□□ 1.3
PHC3Q8NDX5 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.2■■□□□ 1.3
PHC3Q8NDX5 AC079834.2-201ENST00000609776 1949 ntBASIC23.2■■□□□ 1.3
PHC3Q8NDX5 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PHC3Q8NDX5 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PHC3Q8NDX5 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PHC3Q8NDX5 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PHC3Q8NDX5 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PHC3Q8NDX5 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.19■■□□□ 1.3
PHC3Q8NDX5 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PHC3Q8NDX5 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.18■■□□□ 1.3
PHC3Q8NDX5 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PHC3Q8NDX5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.18■■□□□ 1.3
PHC3Q8NDX5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.18■■□□□ 1.3
PHC3Q8NDX5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PHC3Q8NDX5 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
PHC3Q8NDX5 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
PHC3Q8NDX5 AC068473.5-201ENST00000616428 2072 ntBASIC23.18■■□□□ 1.3
PHC3Q8NDX5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
PHC3Q8NDX5 KRT8P33-201ENST00000508125 1423 ntBASIC23.17■■□□□ 1.3
PHC3Q8NDX5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PHC3Q8NDX5 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.17■■□□□ 1.3
PHC3Q8NDX5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PHC3Q8NDX5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.17■■□□□ 1.3
PHC3Q8NDX5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.17■■□□□ 1.3
PHC3Q8NDX5 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PHC3Q8NDX5 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PHC3Q8NDX5 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PHC3Q8NDX5 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PHC3Q8NDX5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PHC3Q8NDX5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PHC3Q8NDX5 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PHC3Q8NDX5 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PHC3Q8NDX5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PHC3Q8NDX5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PHC3Q8NDX5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.16■■□□□ 1.3
PHC3Q8NDX5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PHC3Q8NDX5 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.16■■□□□ 1.3
PHC3Q8NDX5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.16■■□□□ 1.3
PHC3Q8NDX5 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PHC3Q8NDX5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.16■■□□□ 1.3
PHC3Q8NDX5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PHC3Q8NDX5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PHC3Q8NDX5 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PHC3Q8NDX5 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PHC3Q8NDX5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PHC3Q8NDX5 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PHC3Q8NDX5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.15■■□□□ 1.3
PHC3Q8NDX5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.15■■□□□ 1.3
PHC3Q8NDX5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PHC3Q8NDX5 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PHC3Q8NDX5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
PHC3Q8NDX5 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PHC3Q8NDX5 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
PHC3Q8NDX5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PHC3Q8NDX5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
PHC3Q8NDX5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.13■■□□□ 1.29
PHC3Q8NDX5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.13■■□□□ 1.29
PHC3Q8NDX5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PHC3Q8NDX5 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
PHC3Q8NDX5 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PHC3Q8NDX5 AC103834.1-201ENST00000520383 144 ntBASIC23.12■■□□□ 1.29
PHC3Q8NDX5 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PHC3Q8NDX5 AC019171.1-201ENST00000601251 1056 ntBASIC23.12■■□□□ 1.29
PHC3Q8NDX5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
PHC3Q8NDX5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
PHC3Q8NDX5 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PHC3Q8NDX5 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PHC3Q8NDX5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PHC3Q8NDX5 RARRES2P1-201ENST00000474487 481 ntBASIC23.11■■□□□ 1.29
PHC3Q8NDX5 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.11■■□□□ 1.29
PHC3Q8NDX5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PHC3Q8NDX5 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PHC3Q8NDX5 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PHC3Q8NDX5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PHC3Q8NDX5 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PHC3Q8NDX5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PHC3Q8NDX5 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.1■■□□□ 1.29
PHC3Q8NDX5 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PHC3Q8NDX5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.1■■□□□ 1.29
PHC3Q8NDX5 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PHC3Q8NDX5 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PHC3Q8NDX5 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms