Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 YFL034WYFL034W 3222 nt5.4□□□□□ -1.54
RUP1Q12242 OCA5YHL029C 2040 nt5.4□□□□□ -1.54
RUP1Q12242 GRS1YBR121C 2004 nt5.4□□□□□ -1.54
RUP1Q12242 YCR047W-AYCR047W-A 207 nt5.4□□□□□ -1.54
RUP1Q12242 SOH1YGL127C 384 nt5.4□□□□□ -1.54
RUP1Q12242 ODC2YOR222W 924 nt5.4□□□□□ -1.54
RUP1Q12242 STE50YCL032W 1041 nt5.4□□□□□ -1.54
RUP1Q12242 SET5YHR207C 1581 nt5.4□□□□□ -1.55
RUP1Q12242 HES1YOR237W 1305 nt5.4□□□□□ -1.55
RUP1Q12242 PRP46YPL151C 1356 nt5.4□□□□□ -1.55
RUP1Q12242 VMS1YDR049W 1899 nt5.39□□□□□ -1.55
RUP1Q12242 YMR155WYMR155W 1644 nt5.39□□□□□ -1.55
RUP1Q12242 ADK2YER170W 678 nt5.39□□□□□ -1.55
RUP1Q12242 ECM2YBR065C 1095 nt5.39□□□□□ -1.55
RUP1Q12242 ARO7YPR060C 771 nt5.39□□□□□ -1.55
RUP1Q12242 UTP9YHR196W 1728 nt5.39□□□□□ -1.55
RUP1Q12242 PRP40YKL012W 1752 nt5.39□□□□□ -1.55
RUP1Q12242 DDC1YPL194W 1839 nt5.39□□□□□ -1.55
RUP1Q12242 DPH2YKL191W 1605 nt5.38□□□□□ -1.55
RUP1Q12242 YDR541CYDR541C 1035 nt5.38□□□□□ -1.55
RUP1Q12242 VMA16YHR026W 642 nt5.38□□□□□ -1.55
RUP1Q12242 MND2YIR025W 1107 nt5.38□□□□□ -1.55
RUP1Q12242 YKR073CYKR073C 321 nt5.38□□□□□ -1.55
RUP1Q12242 YML131WYML131W 1098 nt5.38□□□□□ -1.55
RUP1Q12242 CDS1YBR029C 1374 nt5.38□□□□□ -1.55
RUP1Q12242 TEF1YPR080W 1377 nt5.38□□□□□ -1.55
RUP1Q12242 TEF2YBR118W 1377 nt5.38□□□□□ -1.55
RUP1Q12242 ORC5YNL261W 1440 nt5.38□□□□□ -1.55
RUP1Q12242 TRK2YKR050W 2670 nt5.38□□□□□ -1.55
RUP1Q12242 CBP4YGR174C 513 nt5.37□□□□□ -1.55
RUP1Q12242 RDL1YOR285W 420 nt5.37□□□□□ -1.55
RUP1Q12242 SEC18YBR080C 2277 nt5.37□□□□□ -1.55
RUP1Q12242 UGO1YDR470C 1509 nt5.37□□□□□ -1.55
RUP1Q12242 PDI1YCL043C 1569 nt5.37□□□□□ -1.55
RUP1Q12242 GUP2YPL189W 1830 nt5.37□□□□□ -1.55
RUP1Q12242 PEX7YDR142C 1128 nt5.36□□□□□ -1.55
RUP1Q12242 YDR154CYDR154C 351 nt5.36□□□□□ -1.55
RUP1Q12242 HRP1YOL123W 1605 nt5.36□□□□□ -1.55
RUP1Q12242 DNF2YDR093W 4839 nt5.36□□□□□ -1.55
RUP1Q12242 SHM1YBR263W 1473 nt5.35□□□□□ -1.55
RUP1Q12242 MTF2YDL044C 1323 nt5.35□□□□□ -1.55
RUP1Q12242 YDL119CYDL119C 924 nt5.35□□□□□ -1.55
RUP1Q12242 YDL144CYDL144C 1071 nt5.35□□□□□ -1.55
RUP1Q12242 SRG1SRG1 551 nt5.35□□□□□ -1.55
RUP1Q12242 SYF2YGR129W 648 nt5.35□□□□□ -1.55
RUP1Q12242 KRE9YJL174W 831 nt5.35□□□□□ -1.55
RUP1Q12242 SSP120YLR250W 705 nt5.35□□□□□ -1.55
RUP1Q12242 RCK1YGL158W 1539 nt5.34□□□□□ -1.55
RUP1Q12242 FLC3YGL139W 2409 nt5.34□□□□□ -1.55
RUP1Q12242 LST8YNL006W 912 nt5.34□□□□□ -1.55
RUP1Q12242 MRPL22YNL177C 930 nt5.34□□□□□ -1.55
RUP1Q12242 MDY2YOL111C 639 nt5.34□□□□□ -1.55
RUP1Q12242 CWC27YPL064C 906 nt5.34□□□□□ -1.55
RUP1Q12242 YDL172CYDL172C 480 nt5.33□□□□□ -1.56
RUP1Q12242 YGR022CYGR022C 330 nt5.33□□□□□ -1.56
RUP1Q12242 DCI1YOR180C 816 nt5.33□□□□□ -1.56
RUP1Q12242 VBA1YMR088C 1689 nt5.33□□□□□ -1.56
RUP1Q12242 CDC19YAL038W 1503 nt5.33□□□□□ -1.56
RUP1Q12242 TAX4YJL083W 1815 nt5.32□□□□□ -1.56
RUP1Q12242 IRC7YFR055W 1023 nt5.32□□□□□ -1.56
RUP1Q12242 YJL107CYJL107C 1164 nt5.32□□□□□ -1.56
RUP1Q12242 PHO86YJL117W 936 nt5.32□□□□□ -1.56
RUP1Q12242 YNL194CYNL194C 906 nt5.32□□□□□ -1.56
RUP1Q12242 ERG7YHR072W 2196 nt5.32□□□□□ -1.56
RUP1Q12242 GUS1YGL245W 2127 nt5.32□□□□□ -1.56
RUP1Q12242 QDR1YIL120W 1692 nt5.31□□□□□ -1.56
RUP1Q12242 TAF11YML015C 1041 nt5.31□□□□□ -1.56
RUP1Q12242 YNL228WYNL228W 777 nt5.31□□□□□ -1.56
RUP1Q12242 RPA49YNL248C 1248 nt5.31□□□□□ -1.56
RUP1Q12242 ARR3YPR201W 1215 nt5.31□□□□□ -1.56
RUP1Q12242 APM2YHL019C 1818 nt5.31□□□□□ -1.56
RUP1Q12242 MPM1YJL066C 759 nt5.3□□□□□ -1.56
RUP1Q12242 MRP17YKL003C 396 nt5.3□□□□□ -1.56
RUP1Q12242 CSL4YNL232W 879 nt5.3□□□□□ -1.56
RUP1Q12242 LEM3YNL323W 1245 nt5.3□□□□□ -1.56
RUP1Q12242 YNR075C-AYNR075C-A 93 nt5.3□□□□□ -1.56
RUP1Q12242 YOR024WYOR024W 324 nt5.3□□□□□ -1.56
RUP1Q12242 BUB3YOR026W 1026 nt5.3□□□□□ -1.56
RUP1Q12242 MRPL36YBR122C 534 nt5.3□□□□□ -1.56
RUP1Q12242 PTR2YKR093W 1806 nt5.3□□□□□ -1.56
RUP1Q12242 MCH4YOL119C 1506 nt5.29□□□□□ -1.56
RUP1Q12242 UBP9YER098W 2265 nt5.29□□□□□ -1.56
RUP1Q12242 HMLALPHA1YCL066W 528 nt5.29□□□□□ -1.56
RUP1Q12242 MATALPHA1YCR040W 528 nt5.29□□□□□ -1.56
RUP1Q12242 EAF5YEL018W 840 nt5.29□□□□□ -1.56
RUP1Q12242 XPT1YJR133W 630 nt5.29□□□□□ -1.56
RUP1Q12242 OCA1YNL099C 717 nt5.29□□□□□ -1.56
RUP1Q12242 PUS1YPL212C 1635 nt5.29□□□□□ -1.56
RUP1Q12242 DED81YHR019C 1665 nt5.28□□□□□ -1.56
RUP1Q12242 RPR2YIR015W 435 nt5.28□□□□□ -1.56
RUP1Q12242 MTC2YKL098W 1074 nt5.28□□□□□ -1.56
RUP1Q12242 APN1YKL114C 1104 nt5.28□□□□□ -1.56
RUP1Q12242 SEC17YBL050W 879 nt5.28□□□□□ -1.56
RUP1Q12242 EXO1YOR033C 2109 nt5.28□□□□□ -1.56
RUP1Q12242 NPT1YOR209C 1290 nt5.28□□□□□ -1.56
RUP1Q12242 ELC1YPL046C 300 nt5.28□□□□□ -1.56
RUP1Q12242 UBC4YBR082C 447 nt5.28□□□□□ -1.56
RUP1Q12242 PDB1YBR221C 1101 nt5.28□□□□□ -1.56
RUP1Q12242 QRI1YDL103C 1434 nt5.27□□□□□ -1.57
RUP1Q12242 YER187WYER187W 426 nt5.27□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms